Physcomitrium patens (spreading earthmoss): 112281185
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Entry
112281185 CDS
T01041
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420
Nucleotide excision repair
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112281185
09124 Replication and repair
03420 Nucleotide excision repair
112281185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112281185
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112281185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112281185
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
112281185
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112281185
TCR (transcription coupled repair) factors
Cul4-CSA complex
112281185
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112281185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Tuberculin
Motif
Other DBs
NCBI-GeneID:
112281185
NCBI-ProteinID:
XP_024373193
LinkDB
All DBs
Position
4:5548750..5556419
Genome browser
AA seq
802 aa
AA seq
DB search
MNIISATKKPTNQEQTSIFDFEKNGKVGMAVEDSSADMMFMDGVEDHPSTGSRPVSGMSL
SSSPGVGTTANLSRKKATPPQPAKKLVIKPFKDKPKLPKDFEEVTWVKIKEAVTAIHLKQ
PVNCSLEELYRAVEDLCLHKMAGNLYRRLQQECESHISVKLRDLVGRSPDAVVFLSHVES
CWQDHCNQMLVIRSIALYLDRTYVIQNSGVRSLWDMGLQLFRRHLSACPEVESKTVSGLL
KLIEKERMGENVDWSLLKHLLRMFNALGIYSETFERPFLECTADFYAAEGTRFMQQTDVP
DYLKHVETRIHEEYERCLLYLDGSTRKSLVATAEKQLLSRHTTAILEKGFSMLMDANRVV
DLQRMYVLFARVNALESLKMTLSTYIKATGNSTVMDEEKDKDMVSWLLDLKARLDAIWDE
SFSRNETFANTLKDAFEHLINLRQNRPAELIAKFIDGKLRAGNKGISEEELEGILDKVLV
LFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDI
ELSREINESFRQSAQARLKLPSGIEMNVHVLTTGYWPTYPPMEVRLPHELNVYQEIFKEF
YLSKHSGRRLMWQNSLGHCVLKSDFPKGKKELSVSLFQTVVLMLFNDAQSLTFQEIKETT
AIEDKELRRTLQSLACGKVRVLNKIPKGREVENEDTFVFNEDFVASLFRIKVNAIQLKET
VEENTTTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPVDLKKRIE
SLIDREYLERDKANPQIYNYLA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatatcagctaccaagaaacctacgaaccaggagcagacatcgatctttgat
tttgagaaaaatgggaaggtaggcatggctgtggaggatagcagtgctgacatgatgttc
atggatggcgtggaagatcatccgtcaactggctcgcgtccggtgtcgggcatgagtttg
agtagcagccccggcgtagggaccacggcaaatttgtcacggaagaaagccactccacca
cagcccgcgaagaagttagtcatcaagcccttcaaagataaaccaaagctgccaaaagat
tttgaagaggtgacatgggtcaagatcaaggaagctgttaccgcaattcacttaaagcaa
ccagttaattgcagtttggaggaactatatcgggctgttgaggatctctgccttcacaag
atggcaggaaatttgtacaggagattgcagcaagaatgtgaaagtcacatttcagtgaag
ctccgagatcttgtagggcgcagtcctgacgctgtagtcttcctgtctcatgttgaaagt
tgctggcaagaccattgcaaccaaatgcttgttatccgaagcattgcgctctatttggat
cgtacatatgttatccagaattctggtgttcgttccttatgggatatgggtttgcaactt
ttccgccgccacctttcagcctgcccagaagtcgagtctaagactgtctctggtcttctc
aagcttatcgagaaggagaggatgggagagaatgtggattggagtttactaaaacacttg
ctgcgcatgttcaatgctcttggtatatactcggagacatttgagaggccgttcctagaa
tgtactgctgatttttatgcagcggaggggacacgctttatgcagcaaacagatgtcccc
gattatcttaaacacgtcgagactcgaattcatgaggagtacgagcgatgcttgctctat
ctggatggaagtactcggaaatctctggtggctactgccgagaaacaacttctcagccgc
catacgactgcgattctggagaagggattcagtatgcttatggatgcaaatcgtgtggtt
gatcttcaaaggatgtacgtgctttttgcacgagtaaatgctttagagtccctcaagatg
accttaagcacttacatcaaagcaacaggcaatagcactgtgatggatgaagaaaaggat
aaggacatggtgtcttggcttttagatcttaaggcccgacttgatgctatatgggatgag
agcttttctagaaatgaaacttttgctaataccttgaaggatgcattcgagcatctgatc
aatttgcgtcagaaccggcctgctgagcttatcgccaagtttattgatggaaagctgcga
gctggcaataagggaatttcagaagaggagttggaaggcatccttgacaaagtgctagtg
cttttcagattcattcagggaaaagatgtatttgaagctttctacaagaaggatctagcc
aagcgcctgcttctaggaaagagcgcctccattgatgcagagaagtccatgatatcaaag
ctcaagacagaatgtggaagtcaattcacaaataagctggaagggatgttcaaggatatt
gagttatcacgagaaatcaacgaatccttcagacaatctgctcaggcacggctgaagctt
ccatcaggaattgagatgaacgttcacgttctcactactgggtattggcctacatatcca
cctatggaagttaggcttccgcacgagctcaatgtgtaccaggaaatattcaaggagttt
tacttgagtaagcacagtgggcgacgtctgatgtggcaaaactccttgggtcattgtgtg
ctgaagtctgacttccccaaaggaaagaaggagctctctgtttctcttttccagactgtt
gttctgatgctcttcaacgatgcccagtctttaaccttccaagaaatcaaggaaactact
gctattgaggacaaagaactccgcagaactctgcagtcattggcctgtggtaaagttcgt
gttttgaacaagataccaaagggcagagaagtggaaaatgaagacacatttgttttcaat
gaggactttgttgcttcccttttccgaatcaaggttaatgcaatacaattgaaggaaact
gttgaagagaacaccacaacaacagagcgagtctttcaggatcgccaataccaaattgat
gctgctattgtgcgaatcatgaaaacgcgcaaggtgttgagtcatacattgttaataact
gaactattccagcagctcaaatttccaatcaaaccagttgatttgaagaagagaatcgag
agtctgattgaccgggagtatcttgaaagggacaaagccaatcctcagatttacaactat
ctcgcttag
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