Physcomitrium patens (spreading earthmoss): 112281261
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Entry
112281261 CDS
T01041
Name
(RefSeq) protein transport protein SEC16A homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112281261
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112281261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
112281261
NCBI-ProteinID:
XP_024373338
LinkDB
All DBs
Position
4:1796357..1805926
Genome browser
AA seq
1444 aa
AA seq
DB search
MLVEVGDGSMAEDSVEALLGLCEKLDLDEQVKEKEGESEGAVEPGAADSNGHLTGEEAAR
IGVEGAAAIEPVPEVDGAADASEGSRPPAQIKSWSDFNAVCAHTFGEQQSFGSFSDFLAN
QPDLPPQSSGPVEMASDVDFFEWGGMGSELLAEGGMGFKTSQPEPPAVAVVEEALPEIDE
RPPETGATTTHEEVAPPQAPAEQDFGIGQEVQTWSELPAEEGQAAVADAGIEDPYPGWYY
DYQACEWRQVEGYGAVAAVTEYAGYDGGYVEHHHLQGIPEANVFQPEESQTPVPEDGTVA
GEVDLGQSQSWGTQSAATQTVADEYPGWKWDYVAQAWVQVPDYNEAWTSSSTTQSQDHIG
QQSWYGQPEQLSQTYSEKPVASNEQQQAQGFSGYGNDGANVMGNGHASQSANPVSTGPVY
AKETRQWEGDLAHNSAAGGGASSFYSPQMNGEQGWGAPAFSQPEQFVSQSLPSVPYASSY
NYGADGGHSGYAQQPWNNPSPFGQYQQQYTNPTASPPKNVQEAMRTCVGRPPISVSAFGF
GGRFIFMKHRDPVTLHTSNGDQAFASGEAWMPGPIQLSSLKGHLPQEPTFAGPLLGGGAS
PKELIKWIDERMATQSQYDSSRLLLGVLKVACQHYGKLRSSGVNSANSAVEEDGPEAALA
KLLAGAGGEQSPYAGMVNRNLGLRGVPSEQQLQATAVEVKKFLVCGKRKDALKCAQEGEL
WGIALVIARQLGEKFFCDTVTEMARRQFVSGSPLRTLSLLLAGQPAEVFAAPSPQSGNPM
GGVVAASEQSEVGQGAMLDDWQENIAIMAANRTQGDERVMLHLGDRLWGVRGEVAAAHVC
YLIADANLESYSGNARLCLIGADHCKNPRTFVTAEAIQRTEIYEHAKVLGNPQSVLISFQ
PYKLVYAEMLVECGKAGDSLKYCQTVLRTLKSAGMRSPEVEACKVLATNMEERLRVHLQD
GHGSMLARGKLVNKIKGTMDWGISKLIGGPPPTAPATDSFGYRPLDNGDHHGGQSLRSSG
GGGQRSGAQMVPSASIAASMERLPQEPNRGPARSQSEPDFGRNAKQGETDGNSGVSPRAS
GLRLAGLGRLGSSFLQRATGLWGSNKREAKLGDANKFYYDEKLKKWVEEGVDPTPDVAPL
PPPPTTSSFMGSAPPQEETHAPPQAVTSKPGTPPLAPTSGNHYSNRRQAGGVRSRYVDTF
NKGGSTTPAKSVMGSLMPPLMPGAGMMSTPANMFVPGPAPSSSFTDNNSDVGESVVGRSS
RNGDAGTSQGLLSDTASSNANMDTGLGYPPTTYSTSPQVSSADNGLASLKAESADLSFHG
GPPVFGGAHTRSSSWGGYPSSFQNPHTPGEEDAFGASFSGHDRLTRSEQMPHVSPMSVGQ
SGYGNFYLLNGSGANASLPLPHPLGVPSAGGENRDPNRQMMGQQFRGSQSVDSLTGEEMQ
EVEL
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggaagtaggagacggatccatggcagaagactcagtggaggccctgcttggg
ctgtgcgagaagcttgatttggacgaacaggtgaaggaaaaggaaggagaatcagagggt
gcggtggagcccggagcggcggacagcaatgggcacttgacgggagaagaggctgcaaga
attggagtggaaggtgcggcggcaattgagccggtgccagaagtggatggagcagcagat
gcgtcggagggctctcgcccgccggcgcaaataaagagttggagtgatttcaatgcagtg
tgtgcgcatacgttcggggagcagcagtcgttcgggtcgttctcagactttcttgcaaac
cagccggatttgccacctcaaagttccggtccggtggaaatggcgtcggatgtcgatttt
ttcgaatggggaggcatgggatccgaactcttggctgagggaggaatgggcttcaagacg
tctcagcccgagccgcccgccgtagcagtagttgaggaggcattgcccgaaattgatgag
cggccaccggagactggtgcaacaacgacacatgaagaggtcgcaccaccgcaagcgcca
gcggagcaggattttggaattgggcaggaagtgcaaacgtggtcggagcttccagcggag
gaagggcaagctgcggtggcggatgctggcatcgaggatccctatccaggatggtattac
gactatcaagcgtgcgagtggcggcaggttgagggctacggcgcagttgcagctgttaca
gagtatgcaggttatgacggaggctatgtagaacatcatcacttgcagggtattccggag
gcaaatgtttttcagccggaggaaagccagactcccgtgccggaggatggaaccgtggca
ggcgaggtggatttggggcagtctcaatcttggggcacgcagtctgccgcaacccaaaca
gtggcagacgagtatccggggtggaaatgggactacgtcgcgcaggcgtgggttcaagta
ccggattataacgaggcttggacgagtagttcgactactcaatctcaggatcacattggg
cagcaatcctggtatggacaacccgagcagctgtcccaaacttacagtgagaagccggta
gcttctaacgagcagcagcaggcccaggggttttcagggtatggaaacgatggtgcaaac
gttatgggcaatgggcacgcatcgcaaagtgcgaatccagtgagcactgggccggtgtat
gcgaaggagacgagacagtgggagggtgatctagcacacaacagtgcggcaggaggtggg
gcgtcgagcttctattctccgcagatgaatggagagcagggttggggagcacctgccttc
agccagccggagcagttcgttagccagagtttgccatcggttccatacgcgtcttcgtac
aattatggtgcagatggcggacacagcggctacgcgcagcagccttggaacaatccctct
cctttcgggcagtatcagcagcaatacacgaatcctacggcttctcctcccaagaacgtc
caagaggcgatgaggacttgtgtaggacgaccgcctatctcagtttcagcatttggattt
ggagggaggtttattttcatgaagcacagggaccctgtgacacttcacactagtaacggt
gatcaggcttttgctagtggcgaggcctggatgccgggtcctatccaactgtcgagcctg
aagggccaccttcctcaggaaccgacttttgcaggtccacttctgggcggtggagctagc
cccaaagaactgatcaagtggattgacgaacggatggctactcaatcacaatacgattct
tcgcggcttctgctgggagtgctgaaggtggcatgccagcattatgggaagttgcggtct
tctggcgtgaattccgcgaactctgcagtggaagaagacgggccagaagcagcactggca
aagttgttggcaggtgctggaggtgagcaaagtccatatgcagggatggttaataggaac
cttggattgcgcggagtgccctcggagcagcagttgcaggccacagcagtggaggtgaag
aagtttctggtgtgtggaaagcgaaaggatgctttgaagtgtgcacaggaaggcgagctg
tggggcattgccctggtcattgctcgacagctgggcgaaaagttcttctgtgacaccgtg
acagagatggctcgacggcagtttgtatccgggtcccctctacgcacactgagccttctt
cttgccggtcagcctgcggaggtgtttgcagcgcccagcccgcaatcaggaaatccgatg
ggtggagtagtagctgccagcgaacagagtgaggtcggacaaggagctatgctggacgat
tggcaagagaatattgccattatggccgctaatcgcacgcaaggggatgagcgtgtgatg
ttacatctcggggaccgactgtggggtgttcgtggggaggtagcagctgcacatgtgtgt
tatttgattgcggatgcaaatttggagtcgtactctggaaatgcaaggttgtgcctgatt
ggtgctgatcattgcaagaatccgcgaacgtttgttaccgcagaggctattcagaggaca
gagatttatgaacacgcgaaagtattggggaatccccaaagcgttttgatatcgtttcaa
ccgtacaagcttgtttatgctgaaatgctggttgaatgtgggaaggctggggactcactc
aaatactgtcaaacagtgttgaggacgttgaagtcagcaggaatgcggagtccggaggtg
gaagcatgtaaagtacttgcgacaaatatggaagagaggctccgagtgcatttgcaggat
ggtcatggatcgatgttggcacgtggaaagttggtgaataaaattaagggcaccatggat
tgggggatttccaagttgattggaggccctcctccaactgctccagcaacggattcgttt
gggtacagaccgttagacaatggggatcatcatggggggcagagcttacgttccagcggc
ggtggagggcagcggtcaggcgcgcaaatggtgccatcagcatctatcgcggcctccatg
gagcggctgcctcaggaaccgaatcgcggtccagctcgcagccagtccgagccagacttt
ggcaggaatgccaagcagggagagacagacgggaattccggagtatctccgagagcaagt
ggattacgtctggctggacttggtcggttgggtagcagtttcctgcagagggcgactggg
ctgtggggttcgaacaagagagaggcgaagctgggagatgctaacaaattttactatgat
gagaaactgaagaagtgggtggaagaaggagtggatcctactccggatgttgcaccgctt
ccgcccccacccacgacttccagcttcatgggatccgctccccctcaagaagaaactcat
gcaccgccccaagctgtaacttcgaaaccggggacgccgcccttggcacctactagcggc
aatcactattcgaatcgtcggcaagctggcggcgttcggtccaggtatgtggacactttc
aacaaggggggttcaacaactcccgcgaaatcggtgatgggatctctgatgccacctcta
atgccaggggcgggtatgatgtccacgcccgccaatatgtttgttccaggtcctgcccct
tcgagttcgttcactgataacaacagtgatgtgggcgagagcgttgtgggcaggtcttca
agaaacggcgatgcaggcaccagccagggtctattgtcggacactgcgagctcgaatgcg
aatatggacacaggcctaggctaccctcctacgacatattccacgagtcctcaggtgtca
agcgcagacaacgggcttgcatctttgaaggcagaaagtgccgatttgagttttcacggg
ggacctcctgtgtttggaggtgcccacacaagatcgtcgtcatggggtgggtacccaagc
tctttccagaatccgcatactcctggagaggaagatgcgtttggagctagctttagtggt
cacgacaggctgactcggtcggaacaaatgcctcatgtgtcgcccatgtcagtgggtcaa
tctgggtatggtaacttttatctactcaacggtagcggggcgaatgcttcgttgcctctt
ccacatcctttaggtgttccaagtgcaggtggtgaaaatagggatcccaatagacaaatg
atgggacaacaatttagaggaagtcagtcggtcgattctctaactggagaggaaatgcag
gaagtagagctttag
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