Physcomitrium patens (spreading earthmoss): 112281339
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Entry
112281339 CDS
T01041
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112281339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112281339
03041 Spliceosome [BR:
ppp03041
]
112281339
03032 DNA replication proteins [BR:
ppp03032
]
112281339
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112281339
Spliceosome [BR:
ppp03041
]
Complex A
U1 snRNP components
Sm proteins
112281339
U2 snRNP components
112281339
Complex B
U1 snRNP components
112281339
U4/U6.U5 tri-snRNP components
112281339
Complex C
U2 snRNP components
112281339
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112281339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
112281339
NCBI-ProteinID:
XP_024373509
UniProt:
A0A2K1KNG3
LinkDB
All DBs
Position
4:9964948..9966371
Genome browser
AA seq
87 aa
AA seq
DB search
MATVPVNPKPFLNDLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEFVDGAFTGNL
GEVLIRCNNVMYLRGVPEDEDAAEDDE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgcctgtgaatccgaagccctttctgaacgacttgactgggaagccggtc
attgtgaaactcaagtggggcatggagtacaaaggttatctggtatcagttgattcttac
atgaacctgcagttagcaagcacggaggagtttgtggatggggcatttactggcaatctg
ggagaggtcctcatcagatgcaacaatgtcatgtacctgagaggcgttcctgaagacgaa
gatgctgctgaagatgacgagtga
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