Physcomitrium patens (spreading earthmoss): 112281407
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Entry
112281407 CDS
T01041
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
KO
K12590
exosome complex component RRP46
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112281407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112281407
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112281407
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112281407
NCBI-ProteinID:
XP_024373657
UniProt:
A9T9V1
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Position
4:complement(7444665..7448167)
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AA seq
256 aa
AA seq
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MVMAKVEVGAAPSLNVAERADGRSASQLRPLSLSRGLLTRAHGSATWSQENTTVLAAVYG
PKPAAMKKENAERAIIEVVWRAKSGLSGSYEKDAEVVVRRSLEYIILTALHPNTAISVIL
QVINDDGSLLACAMNAACAALVDAGIPLNGLLSAVSCGVTHDGQVFLDPTKPEEQKCKAY
VSFVFPSRRLSAVPELPADVDGEPVEYGILTSVTRGAMEVEEYFSCVENCRAAAAKVSEF
SRSSIEQSLKGNRDGC
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggcgaaggtggaggtgggagctgcgccctcgctcaacgttgcggaacgggcc
gatggaaggtccgcttctcagcttcggccgttgtcactttcgcgtggtttgctaacccga
gctcacggatctgctacctggtcgcaagaaaacactacggttttggctgctgtgtacggt
cctaaacctgctgcgatgaagaaggagaacgctgagcgcgccattattgaagttgtgtgg
agggccaagagtggtttgtctgggtcctatgagaaagacgctgaagttgtagtgagaagg
tcgcttgaatacatcatactgactgctctgcaccccaacaccgctatttccgtcatcctc
caggttatcaatgatgatggatctctactggcgtgtgctatgaacgcggcatgtgcggct
cttgttgatgctggcatacccctcaacgggcttctctctgctgttagctgcggggttact
catgacggtcaagtattcctggatcctacaaagccagaagaacaaaaatgcaaagcctat
gtcagcttcgtttttccaagtcgccgtctttctgctgttcctgagttgccagctgatgtg
gatggagagccagtcgagtatggcatattaacatccgtcacgcgtggtgcaatggaagtg
gaggaatatttttcgtgtgtggagaactgccgggccgctgctgcaaaagtttctgaattc
tcacgcagtagtatagaacaaagcctaaaaggcaatcgcgacggatgttaa
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