Physcomitrium patens (spreading earthmoss): 112281662
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Entry
112281662 CDS
T01041
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112281662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112281662
03051 Proteasome [BR:
ppp03051
]
112281662
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112281662
Proteasome [BR:
ppp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112281662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
XPC-binding
UBA_7
RAWUL
Rad60-SLD_2
Dsc3_N
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
112281662
NCBI-ProteinID:
XP_024374201
UniProt:
A0A2K1KMH3
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Position
4:complement(4703979..4708378)
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AA seq
556 aa
AA seq
DB search
MGGEPDGAVAAAEASPAGGSSSNAVVHVRCSNGNKFVVEVDLGATVLTLKGFLVDKSAIP
ADQQRLIYKGRVLKDEQTLNSYGLQSEHTVHLVRGAPPSSTPAGANPAPTSNPTSASPPA
NPGGLGSAPGLGGLGFPGLGLGSSGGASPPFGMGPSEFQQVQQQLMQNPNLMREMMNMPA
VQNLMNNPDLMRTLIMSNPQMREIIERNPDLAHILNDPGTLRQTLDAARNPELMREMMRN
TDRAMSNIEASPEGFNMLRRMYETVQEPLLNAATMGGEGANDMASNPFAAMMGVNGNPPR
PAQAQGGANTNAAGTTLPNTAPLPNPWNPTHSAVLPAAGTGAGQTPSAVPGADAGGVLPD
LAGLGLPDLGMMGGAGGLLDPAMMQQMLQNPQIQQMMQGLLSNPQYMNQMLNLQPQLRNM
LNQNPQFRDMMQNPDFIRQMSSPESLQQMMQLQQAMMGLRGRQTPGQNAGQTPAGLGELG
GLGGLGGGMNMDVLLNMFGGLGNTVPSNPDVPPEQLYASQLSQLQEMGFYDTQENIRALS
AVGGNVHAAVERLLGN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggggggagagccggatggcgctgtagcggcagcggaagcgagcccagcgggggggagc
agcagcaatgcggttgtgcacgtgcgctgctcgaatggtaacaagtttgtggtggaggtg
gatttgggtgcaacggttctcacattgaaagggtttctggtggataagtctgctatcccg
gcagaccagcagcggttaatttacaagggtcgggtgcttaaggacgaacaaacgcttaat
agttacggtctgcaaagcgaacatactgttcatttagtcagaggagcgccaccatcgtcc
acacctgccggtgccaaccctgctcccacgtcaaacccgacttctgcatctcctccagct
aatcctggtggcttagggtctgctccagggttaggtggcttaggttttcctgggttggga
ttgggttcaagtggtggtgcttccccgccctttggaatgggtccttcagaatttcagcag
gtgcagcagcagctaatgcaaaaccccaacttaatgagagaaatgatgaatatgcctgcg
gttcagaatctaatgaacaaccctgatttaatgcgaacattaataatgagtaatcctcaa
atgcgagaaatcattgagcgaaatccagatttggcccatattctgaacgatcccggcaca
ctccggcagacattggatgccgctcgaaatcctgaacttatgcgagaaatgatgagaaat
acagatcgggccatgagtaacatcgaagcctcgcccgaagggtttaacatgctcaggcgc
atgtatgaaaccgtccaggaaccgcttttgaatgctgcaaccatgggtggagaaggcgca
aacgacatggcttcgaatccgtttgcagctatgatgggagtaaatgggaatccaccacgt
ccagcccaagctcaaggtggagctaatactaatgctgctggaacaacactaccgaacact
gctcctctaccgaatccttggaatcctacacactcagctgtgttaccagctgctggaact
ggagctggccagacaccatcggcagtaccaggagcagatgcaggaggggttcttccggat
cttgcgggacttggccttccagatcttgggatgatgggcggtgctggtgggcttctggat
cctgcaatgatgcagcagatgcttcaaaacccgcagatacagcagatgatgcaggggctc
ctgtccaatcctcaatatatgaatcagatgttgaaccttcagcctcagttacggaatatg
ctgaaccagaatcctcaatttagggacatgatgcaaaatcctgacttcattcgacaaatg
agcagtcctgagagcttacagcaaatgatgcaacttcaacaagccatgatgggtctccgc
ggacggcaaactcctggacaaaatgctggtcaaactccagctggactgggtgaactaggt
ggactgggcggacttggcggtggaatgaatatggacgtcttacttaatatgtttggaggt
cttggcaacactgttccttctaaccctgatgtgcctcctgaacaactatacgcctcacag
ctgtcccagttgcaagaaatgggattctatgatactcaagagaatattcgtgcacttagt
gctgttggcggaaatgtacatgctgctgttgagcggcttctagggaactag
DBGET
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