KEGG   Physcomitrium patens (spreading earthmoss): 112281736
Entry
112281736         CDS       T01041                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112281736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppp03000]
    112281736
   03021 Transcription machinery [BR:ppp03021]
    112281736
Transcription factors [BR:ppp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    112281736
Transcription machinery [BR:ppp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     112281736
  RNA polymerase III system
    TFIIIB
     112281736
  RNA polymerase I system
    SL1/TIF-1B
     112281736
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 112281736
NCBI-ProteinID: XP_024374343
LinkDB
Position
4:complement(11154781..11158427)
AA seq 200 aa
MAELVLEGSQPVDLAKHPSGIVPTLQNIVSTVNMDCRLELKTIALHARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAQFKDFKIQNIVG
SCDVKFPIRLEGLAYAHGHFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
IYEAFENIYPVLTEFRKIQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctgaactggtgttggagggcagccagcctgtggaccttgccaagcacccctccggg
attgttcctactctgcagaacatcgtttcgactgtgaatatggattgccgcttggaattg
aagactattgctctacacgcccgaaatgctgaatataatcccaagcgttttgcagctgtt
atcatgcgaatcagggagcctaaaacaactgctcttatttttgcatccggtaaaatggtg
tgcacgggtgccaaaagcgagcaacagtcaaaattggctgcaagaaagtatgctcgaatc
attcaaaagcttggttttccagcccaattcaaggattttaaaattcagaatattgttggt
tcatgtgacgtcaaattccctatccgactcgaaggtttagcttacgctcacggtcacttt
tcaagttatgagccagaattgttcccaggattgatatacaggatgaagcagccaaaaatt
gtgttactgatcttcgtgtccggaaagattgtccttaccggtgccaaggtgagggacgag
atttacgaggcttttgagaatatttatcccgtgttgacagagtttaggaagatccaacag
tga

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