Physcomitrium patens (spreading earthmoss): 112281737
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Entry
112281737 CDS
T01041
Name
(RefSeq) serine hydroxymethyltransferase 4-like isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00260
Glycine, serine and threonine metabolism
ppp00460
Cyanoamino acid metabolism
ppp00630
Glyoxylate and dicarboxylate metabolism
ppp00670
One carbon pool by folate
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01200
Carbon metabolism
ppp01230
Biosynthesis of amino acids
ppp01240
Biosynthesis of cofactors
Module
ppp_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
112281737
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112281737
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
112281737
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112281737
Enzymes [BR:
ppp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
112281737
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
112281737
NCBI-ProteinID:
XP_024374344
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Position
4:complement(8306949..8311052)
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AA seq
645 aa
AA seq
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MDDVEMKPSLSLGFVQMMQQSVQQQMSAGGQVHSTLPALSRGSSLSDAIQVETAMQITSR
DSAQLLRHKTGASGGFSPLGSTQGLKRKSSALLSGQFRTPTLPASMAGRNNSASCGQQSQ
LTYHHSSRGSQPVVHQMSHGAFRAVVSSDHHQNGISKPVLNYPSNMSPRVVVNHNSYQTH
DNESRKRAVRDWGNRPLAEVDPDLWKIMEKEKSRQWKGIELVASENFTSLAVFEALGSHL
TNKYSEGLPGSRYYKGNEYIDQIESLCISRALAAFHLDNERWGVNVQPYSCSSANFAVYT
ALLQPNDRIMGLDVLSGGHVSHGYHTQSGKKIPAASIYFQTLPFKVHPETGLIDYDKVEE
IALLYRPKILICGGSSYPREWNYSRFRQVADKIGAVLMCDMAHISGLVAAQECLSPFDYC
DVVTTTTHKSLRGPRGGMIFFRKGLKSASRPADGQYNFEKEINIAVHPTLQGGPHNNHIA
ALAAALKQAASAEYKAYIQQVIKNAQSLAEGLKRRGCKLVTDGTDNHLMLWDLRPFAIPS
SLFEEVCEACHITVNKSAVYGDSSSFQPGGVRIGTPAMTSRGCNEGDFDIIADLLHRAVQ
ITTALHKENPKQQRNLGSNSDVQALRAKVEEFATAFEMPGFDVPC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtggagatgaagccaagtttatctttggggtttgttcaaatgatgcagcaa
tctgtgcaacagcagatgagtgctggaggccaagttcacagcactctgccagctctgtcg
aggggaagttctttgagtgatgctattcaggtagagacggccatgcaaatcacctccagg
gacagtgcacaacttctccggcacaagactggtgcgtcaggtgggttctctcctcttggg
agcactcaaggactgaaaaggaagagctctgctttactcagtggtcaatttcggactccg
acacttcctgcaagtatggctgggcgaaataattctgcatcttgtggacagcaatctcaa
cttacgtaccatcattcgtctcgcggatcgcaaccagttgttcatcaaatgtctcatggt
gctttccgggctgttgtttcatcggatcaccatcagaacgggatttccaagccagttttg
aactatccgtctaacatgtctccaagagtggtagttaaccacaacagttatcagactcat
gataatgaatctcggaaacgagcagtgagggattggggaaatagaccacttgctgaggtt
gatccagatctgtggaagattatggagaaggagaagagtcggcaatggaaaggtatagag
ctggttgcatctgaaaattttacttcactggctgtgtttgaagctctcggaagtcacctc
acaaacaagtattcggagggactccctggttccaggtactacaagggtaatgaatacatt
gatcagattgagtccctttgcatttctagggcgcttgcagcttttcatctggacaatgag
agatggggggtaaatgtccagccatattcatgctcttctgccaattttgctgtttacact
gcattgttgcagccaaatgatcgaattatgggtttggatgtcctatccgggggccatgtt
agtcatggttatcacacacagagcggcaagaaaatccctgctgcctctatatatttccag
actttgccattcaaggttcaccccgaaacaggacttattgactatgataaagtggaggaa
attgcgctactatatcgtcccaaaatccttatatgtggaggaagctcatatcctagggag
tggaattactcccgatttcgccaggttgccgacaagatcggtgccgttcttatgtgtgat
atggctcacatcagcggtctcgttgcagcgcaagagtgtttaagcccgtttgactactgt
gacgtggtcactactacaacgcacaagtcacttcgtggacctcgcggtggcatgatattt
tttcggaagggattgaagtcagccagcaggccagccgatgggcagtataattttgagaag
gaaatcaacattgcagtgcaccctacgttacaaggtggcccgcacaacaatcacatagca
gccttagctgcagctcttaagcaagctgcgtctgcagaatacaaggcgtatattcaacaa
gtgattaagaatgctcagtcacttgctgaagggttaaagcgtcgagggtgtaagctggta
acagacgggacagacaatcatctgatgctatgggaccttcgtccatttgccatcccgagc
agtctgttcgaagaagtttgtgaagcgtgtcacataacggtgaacaagagtgccgtttat
ggtgacagcagctcatttcagcctggtggtgtacggattggaactccagcaatgacatca
cgaggatgtaacgaaggggatttcgatattatcgcagatttgcttcatcgggctgtccaa
atcacaacagctctgcacaaggagaatccgaagcagcagcgcaacctgggaagcaattct
gacgtgcaggctctgagggccaaggttgaggagttcgctaccgcatttgaaatgcctgga
tttgatgtaccctgttga
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