Physcomitrium patens (spreading earthmoss): 112281886
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Entry
112281886 CDS
T01041
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112281886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112281886
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112281886
Prokaryotic type
Archaeal type
TFB
112281886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
Trm112p
A2L_zn_ribbon
SNaCT13
Cyclin_C
DUF3737
DUF7573
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
112281886
NCBI-ProteinID:
XP_024374644
LinkDB
All DBs
Position
1:26731307..26735092
Genome browser
AA seq
311 aa
AA seq
DB search
MNKTVCPECRKATEVVVDHAAGDMVCAECGLVLEQHSVDESSEWRTFSDSTSSDPVRVGG
PSNPLLTDGGLSTIISKPNGAQGDFMSSLGRWQNRGSNPDRSLIIAFRSIGTMADRLGLV
STIKDRANEIYKKVEDLKSIRGRSQDAILAACLYIACRQEDKPRTFKEICSVANGASKKD
IGRATKFIVKQLEEDMGISMEMGTIHAGDFLRRFCSHLNMENNEVRAATETVKKSEMLDI
RKSPISVAAAAIYMISQLNEKDKKALKDISRVAGVAEVTIRNSYKDLYPHAAKLIPDWFL
KEVDLKNLPAP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagtgtgtcctgagtgtcggaaggcgacagaggtggtagtggaccatgcc
gcgggggacatggtgtgtgcagaatgcggattagtcttagagcagcattccgtagatgaa
agctcggaatggcgaacgttttcggattcaacttccagcgacccagtccgtgtcggtggt
ccttccaatcccctcctcacagatggtgggctgtcaaccatcatatccaagcccaacggt
gcgcagggcgatttcatgtcatctcttggacgttggcagaacaggggctcaaatcctgat
cggtctcttatcattgcttttcgatcaattggaaccatggcagacaggctcggactagtg
tcaacaatcaaggatcgggccaatgagatatataagaaggtggaagacctgaaatctatc
cgtggtcgaagtcaggatgcgatactggctgcctgcttatacatcgcttgccgacaggaa
gataaacctcgaacattcaaagaaatatgctcagttgctaatggagcatcgaagaaggac
attgggagagcaaccaagtttattgtgaagcaattagaagaggatatgggtatttctatg
gagatgggaacaatccatgctggtgacttcttgaggagattctgctcgcatctgaatatg
gaaaacaacgaggtcagagctgccacagagacggtaaagaagtcagagatgctggatatc
cgaaaaagtccaatatcagttgctgctgctgctatatacatgatctcacagcttaatgaa
aaagataagaaagctctaaaagacatatcaagggtggctggggtggctgaagtgactatc
cgaaattcttacaaggatctctatccccacgcagccaagctcatacccgactggtttctt
aaagaagttgatttgaagaatttgccagctccttag
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