Physcomitrium patens (spreading earthmoss): 112281998
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Entry
112281998 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K23288
syndetin
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112281998
Membrane trafficking [BR:
ppp04131
]
Protein recycling
Others
EARP complex
112281998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
112281998
NCBI-ProteinID:
XP_024374840
UniProt:
A0A7I4DRT5
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Position
5:11630853..11641823
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AA seq
1104 aa
AA seq
DB search
MEDIFSLGEKWIKTVASSRVLTRSASGRPEVPARAAAAALVARKLATLPPHERVSLSGGA
GSIYAARLRGEPPEKLEEVFYEDKFDPVRHLLEHIPAEGVNQGYFDGQVGQRLQQLDVIT
ESLSKQVMEHHEEMVKGMQLVTELERDLQIASIIVKNGRRHLSRSIIEVSRDLIVAANVN
KKQVLLDIVPVLERLHQALDIKSRLDSVVDEGDFSKALHMCSECLLLLEECPDLVAVQEM
NQSIEEWLQRTIAKVDALLMDVCRKFEAEKYKTVVNAYTLLDDVTSLADKVQSFFAQNVV
TETHDVLKNLLFEGEDAQIALKKSRLPYRDLCMLLPEEKFKQVLCKILEVLFDLMCSYHT
MMTWHQKPESAEIKPPEDPQQAVLLNRKLQHRRSGSHGDLNQIAKERRHVRTGSLSGMRT
GSELFATPMSPTSINASRLLGRSASRRRPGADISETFENGTTSSGELDVRFLEDDGDNND
LVRREEVVTATVARALERGRKTVWELAARRVAALLSNDAVCLSTPHQFLQSLDWVNKFIL
AGEAFCGAEAASLRTKLTKQSEQYFGAYHCQNLEILRMHVEKELWQPLSSLALKSVNLAG
LTGHGASLVRPSVLGENPVSSQGPSSLRAGAQKTSFADWLRLGNPFTEKALHSPVTTRVV
DGEAVKVNGVDNGEVMANGGVKVEEEEDDENDDLLADFIDEDSQLPGRLYHDFRKSSNPM
EAKNIQGSNEDKQLVLTNSSVNILRYMDKYARLMQILQPIAADVFKGLGQLFELYFFSIF
KTFGQREAFGGSRGQESFLLTPQLRATLLRISQGLEAQRLKQSASMGAQPSIPIMGASVG
VINSPGTQSDTPLSDVSGGGEIVMAPTNLYAVKERTVATESLACLSQMLKRSRPLLQAML
DQDSLASVEFFYARTIDAVPDLRDHVYKAVARMLLNVGGYVERIASVRWELKDLGMEHNG
YVDSLLGAYKQFSTRLGYGGLDKEMHELLLEYGVDTLAETIVEGFSRVRRCNNEGRALMS
LDLQVLINGLQHLAPQRLKSNLQVVETYIKAFYLPETEYLHWVRTHPEYTKSQAISLINL
VATANNWKRKTRVDIIDRIEAGDL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatttttagcttaggcgagaagtggattaaaacagtggcatcttcaagagtt
ctaacaaggtcagcatcaggacggcctgaggtaccagctcgagctgcggctgctgctttg
gtggccaggaaacttgccactcttcctccccatgaacgagtgtcgctatctggaggggcg
ggttctatatatgcagctcgattacgtggagagccaccagagaagcttgaagaagtgttc
tatgaggataaatttgaccccgtcagacatttgctggagcatattccagctgaaggtgtc
aaccaaggctattttgatggccaggttgggcagagattgcagcaacttgatgttattacg
gaaagcttgtctaaacaggtgatggaacaccatgaagagatggtgaaagggatgcagctt
gttacagagcttgagagagatttgcagatagcgagtatcatcgttaagaatgggaggcgg
catctgtcaaggtctataattgaggtttccagagatcttattgtggctgcaaatgtgaac
aagaagcaagttttgttggatatagttccagttttggaacgcttacaccaagctttggat
attaaatcacgccttgacagtgtagtggatgaaggagacttttctaaagctctgcacatg
tgttcagaatgtttgctgcttttggaggaatgcccagacttagtagctgttcaagaaatg
aatcagagcatcgaggaatggctgcagagaaccattgccaaagtagacgctttgcttatg
gacgtatgtcgaaagtttgaggcagagaaatacaaaactgttgttaatgcttatactttg
ctggacgatgtcaccagtcttgctgacaaggtgcagagcttctttgcacagaatgttgtt
acagaaacgcacgatgtgcttaagaacctattgtttgagggagaggacgcacaaattgca
ctgaaaaagagcagactcccatatagagacttgtgcatgcttcttcctgaggaaaagttt
aagcaagttttgtgcaaaatcctggaggtgcttttcgacctaatgtgttcataccacacc
atgatgacatggcaccaaaaaccagagtctgctgagattaaacctcctgaggatccccaa
caagcggtccttctaaaccgaaagctccagcaccgtcgctcaggtagtcacggggatttg
aaccaaatcgccaaagaaaggaggcatgttcgtactggatcactctccggtatgagaaca
ggatcagaactttttgctacacctatgtccccaacttccataaatgcaagcaggctgttg
ggtcggagtgcgtcgagaagaagacctggtgctgatatttcagaaacatttgaaaatggc
acaacctcaagtggggaactagatgtcagatttttagaggacgacggagataataatgat
cttgtgaggcgagaggaagtagtgacagcgactgttgcacgtgcgttggaacgtgggagg
aagacagtctgggaattagcggcacgtcgggtggcagcgttactttcaaacgatgcagtg
tgtctatcaaccccgcaccagtttttacaaagcttggactgggtgaacaagttcatactt
gcaggagaggcattttgtggtgctgaagctgcatcgttacgaaccaagcttacgaagcag
agcgaacagtactttggagcttatcactgccaaaatctcgaaattctgcggatgcatgtc
gaaaaggagctgtggcaaccgctgtcatcgttggcgcttaagtcggtgaatttagctggt
ctaactggtcatggtgcatcattagtccgaccctctgttttgggtgagaatcctgtatct
tctcaaggacctagcagtcttcgtgctggtgctcaaaagacgagtttcgcagattggtta
cgtttgggaaatcccttcaccgaaaaagcactgcatagccctgtcaccacaagagttgtg
gatggagaggctgtgaaggtaaatggtgttgacaatggagaggttatggcgaatggcggt
gtgaaagttgaagaggaggaagatgatgaaaatgacgatctactggctgactttatagac
gaggatagccagttgccaggtcgattgtaccatgattttcggaaaagctctaatcctatg
gaggcaaaaaatatacaaggttctaatgaagacaaacaattggtacttacaaattcttcg
gtgaatatccttagatatatggacaagtatgcacgattgatgcagattttgcagccaatt
gctgcggatgtgtttaagggtttgggacaactctttgaattatactttttctccattttt
aagacttttggacagcgagaggcgtttggaggtagtcggggtcaagaatctttcctgctt
acccctcaactgcgggcgactctgttaaggatttcgcaaggactagaggcgcaaaggttg
aaacagtccgcaagcatgggtgctcagccttcaatacctattatgggtgcctcagttgga
gttatcaattcacctggcacccaatcagatacgccactgagcgatgtatctggaggtggt
gagatagtgatggccccgactaacttgtatgctgttaaggagcgcacagtggcaacggag
tcactggcttgtctttcacaaatgttgaaaagatcaaggccattgttgcaagctatgctg
gaccaagattcattggcgtctgttgaattcttttatgctcgcacgatagatgcagtgcca
gatttgagagatcatgtgtacaaggccgtggcacggatgctcctcaatgtgggaggttac
gttgaacgcatagctagtgtgagatgggagcttaaagacttgggaatggaacacaatgga
tatgtggattccctactgggtgcatacaagcagttctcaacgagattgggttatggggga
cttgacaaggagatgcacgagcttttgttagaatatggagtggatacacttgctgaaact
attgttgaaggcttctcacgcgtaaggagatgcaataatgaaggccgtgctttgatgtcc
cttgatctccaggtgcttataaatggcttgcagcatttagcgcctcagagactgaagtcc
aacttgcaagttgtggaaacctacataaaggcattctatttgcctgagactgagtacttg
cactgggtcagaacacatcctgagtatacgaagtcacaagctataagtcttatcaacctt
gttgccactgcaaataattggaagaggaaaactagggttgatatcatagatagaatagag
gctggtgatctttga
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