Physcomitrium patens (spreading earthmoss): 112282015
Help
Entry
112282015 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112282015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112282015
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112282015
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
HECT type E3
112282015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
112282015
NCBI-ProteinID:
XP_073390502
LinkDB
All DBs
Position
5:7600851..7610160
Genome browser
AA seq
1342 aa
AA seq
DB search
MNEGKKKQRMNESTSKDECGRARFSSKREPGLGIGCRHPLFRRHILVICCYGGRFAVGSH
HAYTGGTIPSPWPSGSRLPPLPEASFPGSRPFSSTAALRGCSAKEQNQQELLDRVTQERA
IGSLVQRGDVSALVVQRIWRGRTVARKVAAQARVEWDEKFLSRHSEDESPVSANVISNQI
LRPLFMILKPSSPFNLRQIAEDAGRLTTCFRLLLQSIHNPDMRFNYCNLSVGSPEEMSKW
MYQARELLRLACAALQKESYADQKGTKTNHLAQADSNLARLAIQVMVSLTDSSTWKCLGG
PEQVVRKRKADLVVLSLLEWLASESAGFFLAVRSYILENFLVPGIKNQEVSPCGKEDKLI
ITALLRPLLVLSAECRKDGKGAENSKNYKDYTFAAERAAALFSVHILTIPFLTQRLPQPL
LPALQDPLVLSPCLRFFEVPIRDPPQIVTATSVLPCLPSFQGRVDCELVDVPLSAWALSN
VVCLASHTLKHNPRFMKSSPCQKYVQALCCLLEDLNMWIETIRKRREAEKSVSEEEGDKD
VENTKNVVIGDVISKSCEGIIIQLLVESLSPLHQQWHLVELVEKATFNQSTPMVFISVAK
GSIKGAKEKLFTLSDVAKIYSILLQVFAVLNPFGGALPIVNLIAFTPSIVPLLWSWLHAS
PGLAHLLKLNLQEQGNAKHQLETQAIQAEKAILIRTGVGVWAAVLGLRNKLTRHDAALER
RAVNERTETSRSADVGSYRSGTRIDPELARRWAAEIRDMRTISNSPSRASGSNESLGMSK
SIRDMKTEGNVAPQITDMDNVKSGSECVPEEVLPVLLLFCEAYSHFLFVLDDEDFYERQE
PFTLAQQKVISGMLNTLVYHELLSTCKRSNFLLMDVAIKCVKPLYERDCRRSFCPPYLWI
APAVATQLPSRAAAGASEGNGCKSSQMAALGAILRTIPHVLSFEERVHIFREFVRTDKLL
KGMEGGTVSPVPGTISIVVKRDNLFEDGLAQLNPLGPRLKSCINVSFENESVLAAADLDH
GGSLKELLTDLANTAFDPEYGLFVQTATDGLLLPRAAAGNLDSELRKLKFLGQIVGKALY
EGILLEHSLSPLFISKVLGRCSFLDDLSSEDSELHRKLVYLKKASEDAQDLKLNFTVKED
LFDEHWIVELQPGGADIPVTNENKLQYVNSVVNHKLNRQMKPVTAAFVRGMADLIDPEWL
GLFNAKEFNRLVSGGDHDFDVDDLRIHTCYANGYSKSSLTIKIFWEVVREFEEEERSALL
KFVTGCSRPPLFGFEYLQPAFTIERVVSETSAWAKIFGQDVNCLPTASTCNNTLKLPMYK
RASFLKEKLQCAMKSSTRLKHP
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagggaagaaaaaacaacggatgaatgaaagtacatcgaaggatgaatgtggt
agagcacgtttttcatccaagagagagcctggtctgggcatcggatgcagacacccgttg
ttccgcaggcatattttggttatttgctgttatggtggtcgctttgctgtcggaagtcac
catgcctacacagggggcacgattccgtcgccctggccctctggttctcgacttcctccg
ctaccggaagcctcttttcctggttctcgtcccttctcaagcaccgcggctcttagaggt
tgtagtgcaaaggagcaaaatcagcaggagttgctggatcgagtgacacaggagagagca
atcggttctcttgtccaacggggtgatgtctcggccttggttgttcagagaatttggagg
ggtcgcactgttgcaagaaaagttgctgcccaagctcgcgttgaatgggatgagaaattt
ctatcacgacattctgaggatgaatccccagtttccgctaacgttatctctaatcaaatc
ctgcgtcccctcttcatgatactgaagccgtcaagtcctttcaatctgcgtcagatcgct
gaagatgctggccgacttacaacatgttttcgactactcttacaaagcattcacaatcca
gatatgcgattcaactattgcaatttatctgttgggtctccggaagaaatgtcgaaatgg
atgtatcaagcaagagaacttctgaggcttgcttgtgctgctttgcaaaaggagagttat
gcagatcagaaagggacgaaaacaaaccatttagctcaagccgactccaacttagcaaga
ttagcaatacaagtgatggtttcattaacggacagtagcacatggaagtgtttgggtggt
ccagagcaagtggttaggaagcggaaagcagaccttgtggtactgagtctgctggagtgg
cttgcaagtgaaagtgccggttttttcttagctgttcggtcatatatattagaaaatttc
ctggttccagggattaagaatcaagaagttagtccttgtgggaaggaagacaagcttatt
atcactgccttgttgagacccctgcttgtactgtccgccgagtgtagaaaggacggaaaa
ggtgctgagaactcgaaaaattacaaggactacacattcgcagcagaaagagcagctgca
ctattctctgtgcacattctcaccattccttttctcacgcagcgtcttcctcagccgcta
ttgccagctttgcaagaccctttagttttgtctccatgcctgcggttcttcgaggtgcct
atcagggatccacctcaaattgtaacagctacctctgttttaccctgccttccatcattc
caaggaagagttgattgcgagttagtagatgttcctctttcagcatgggctctgtccaat
gttgtgtgtcttgcttcccatactctgaaacacaaccctcgatttatgaagagttcacca
tgccaaaaatacgttcaagccttatgttgccttttagaggacttgaatatgtggatcgaa
actataaggaaaaggagggaagctgagaagagtgtaagtgaggaggaaggcgacaaggat
gttgaaaacactaaaaatgttgtgattggggatgtgatttcaaaatcttgtgaggggatc
attattcagttgcttgtggaaagcctaagccccttacatcagcaatggcatcttgtggaa
ctcgtggagaaagcaacttttaaccagtccactcctatggtgttcatatctgttgcaaaa
ggatcaatcaagggtgccaaggagaagcttttcactctatcagatgtagcaaaaatatat
tccattctgctgcaagtttttgcggtcctgaatcccttcggaggagctttacccattgtc
aaccttattgccttcactccttcgattgttccccttctttggagttggctccatgcctca
cctggcttggctcacttgttgaagttgaatcttcaagagcagggtaatgctaagcatcaa
ttggaaacccaagcaattcaagcagaaaaggcgattcttattcgaacgggggttggagtt
tgggctgctgttttaggattgagaaacaaattaacaagacatgatgctgccctagaaaga
agggctgtgaacgaacgcacagaaacaagcagatcagctgacgttggatcctataggagt
ggtactcgcattgacccggagctggctcgaagatgggctgctgaaattcgagatatgaga
acgatctctaatagtccaagtagggctagtggatcaaatgagtctctcggtatgtcgaaa
tcaattagagatatgaagactgaaggtaatgtggcacctcagatcacagatatggacaat
gtgaagagcggttccgaatgtgtgcccgaggaagtgctacctgtgttgctgttgttttgt
gaagcttactcacattttttgtttgttttagatgatgaagacttttatgagcgtcaggaa
ccgttcacactcgcgcaacaaaaggttatatcaggcatgctcaatactttagtgtaccat
gagttgttgtcaacttgtaagcgaagtaattttcttcttatggatgttgcaatcaaatgt
gtaaaacctttatacgaaagggattgccggcgtagcttttgtcctccatatctttggatt
gctccagctgttgcgacacagctcccttctcgtgctgcagcaggtgcctcagaggggaac
ggctgtaagtcttcacagatggcagccttaggggctatcctgagaacaattcctcacgta
ctctcatttgaagagagagtgcacatattccgtgagtttgtgcgaaccgataagctactg
aaggggatggaaggaggtaccgtaagtccagttccaggaacaatctcaatagttgttaaa
agggacaatctttttgaggatggacttgctcaactgaacccattggggcccagattgaaa
tcctgcattaatgtttcttttgagaacgagagtgtacttgcggcggcagatcttgaccat
ggtggttcattgaaagagctcctcactgatctcgccaatacagcctttgatcctgaatat
ggtctttttgttcaaacagcgacagatggcttgcttttacctcgcgctgctgccggaaat
cttgattctgaattacgaaaactgaaatttctagggcaaattgttgggaaagcactgtat
gagggaattctgttagagcattccctctcaccactctttatttcaaaagttttaggtcga
tgtagcttccttgatgatctttcaagtgaagactcagagcttcaccgaaagcttgtttat
ctcaagaaagctagcgaagatgctcaggacctgaaactcaactttactgtaaaagaggat
ctgtttgacgagcattggatcgtggagttgcagcctggtggagctgatatacctgtgaca
aatgaaaacaaactgcagtatgtgaattccgtggttaaccacaaacttaaccggcagatg
aaacctgtgacagctgcatttgtaagaggcatggcagaccttatcgatcctgagtggctt
ggacttttcaatgctaaggaattcaatcggctggtgtcaggaggggaccatgattttgac
gtggatgacttgcgcatacatacctgctatgccaatggctattcgaagtccagtctaacc
attaaaatattctgggaggtagtccgagagtttgaagaggaggaaagatctgcactttta
aaatttgtaaccggctgttcgaggccacctctttttggcttcgagtatttgcagcctgcc
tttacaatagagagggtagttagtgagacgtcagcatgggccaagatctttggtcaggat
gtgaactgtttgccgactgcctctacttgtaacaacaccttgaagcttcctatgtacaag
agagcgagctttttgaaggaaaagttgcagtgtgccatgaaatcaagcacaaggttaaaa
catccataa
DBGET
integrated database retrieval system
