Physcomitrium patens (spreading earthmoss): 112282433
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Entry
112282433 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K12816
pre-mRNA-processing factor 17
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112282433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112282433
Spliceosome [BR:
ppp03041
]
Complex C
Other components
Step II factors
112282433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
eIF2A
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
112282433
NCBI-ProteinID:
XP_024375770
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Position
5:complement(19452581..19455301)
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AA seq
596 aa
AA seq
DB search
MDLLAHYGDGDRADELDLHMRTEGEVSSSGTSSPDSSPVRLLEPRTAAAPEVSDSLLVIG
ARGDIGSVGGGGVRKPLDPSQRKVNYNPTAEQLWAPVAGPAHPYAKDGVAQGLRNHKIGF
VEDAAIAPFMFDEQYNTFHAYGFAADPGATAGNNIVGDSSAVKATDGASVYNLPQHEHRK
QRKVNKKRSRSDDEELDEEEKEKVENPASEEWLLKNSQSPWAGQKEGLQGELTEEQTVYA
ELHAEKKSQKEKGEKVDIDDKSTFHGKEEVDYQGRSWIAPPKDVKATNEHCYIPKRWVHT
WSGHTKGVSAIRFFPKYGHLLLSASMDTKVKIWDVHGSGKCMRTYMGHSKAVRDITFNND
GSKFLTASYDRKIKLWDTETGQVISTFSTGKIPYVVKFNPDDDKQNVLLAGMSDKKIVQW
DMNTGQISQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS
MPAITVHPNTNWFAAQSLDNQILIYSTRERFRLNKKKRFAGHIAAGYACQVNFSPDGRFI
MSGDGEGRCWFWDWKTCKVFRTLKCHDSVCIGVEWHPLEQSKVATCGWDGLIKYWD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctagcgcattacggagacggagacagagcggacgagctggacttgcacatg
cggactgagggagaggtctctagtagtggcacttcttctcccgactcttcaccagtccgt
ttgctagagcccaggactgctgccgctccggaggtgagcgattctttgcttgttattggc
gcccgtggtgacataggctctgtcggtgggggtggtgtgcggaagccgttggacccatcg
cagcggaaagtgaactacaatcccactgctgagcagctgtgggcgccggtggcaggtccc
gcgcacccatatgcgaaggatggtgtggcgcaggggttgcgaaaccacaaaatagggttt
gtggaggatgcagccatagcgccgtttatgttcgacgagcagtacaacacgtttcatgct
tatgggttcgcggctgaccctggagctacagcgggaaacaacatagtcggggattccagt
gccgtgaaagctactgatggagcctcggtatacaacctgccgcagcacgagcataggaag
cagcgcaaggtgaataagaagaggtctaggagtgacgacgaggagcttgacgaggaggag
aaagagaaggttgagaatcctgcatctgaagaatggctacttaaaaattctcaatcgccg
tgggctggccagaaggaaggtttgcagggcgagctcaccgaggagcaaacagtgtatgca
gaattgcatgccgagaaaaagagtcagaaggagaaaggagagaaggtggatatcgatgat
aagagtaccttccatggcaaggaggaggtggattaccaaggacgatcgtggattgctcct
ccgaaggatgttaaggccaccaatgagcattgttacattccgaagagatgggtgcacaca
tggagtgggcacaccaagggtgtttctgcgattaggtttttccctaagtatggacatctt
ctcctttccgccagcatggacacgaaggttaaaatatgggacgttcatggtagtggaaag
tgcatgcgaacgtacatgggtcattctaaagcagtcagggatattacttttaacaatgat
gggtcgaagtttctgaccgcttcgtatgatagaaagatcaagctttgggatacagagact
ggacaagttatttcgacgttcagtacaggaaaaattccttacgtggtgaagttcaatcct
gacgatgataagcaaaatgttctgcttgcggggatgagtgacaagaagattgtgcagtgg
gacatgaacactgggcagatcagtcaagaatatgatcagcacttaggtgcagtcaacaca
attacatttgttgataacaatcgaagatttgtaacatcaagcgatgataaatcgttgcgt
gtgtgggagtttggtataccagtggtgatcaaatatattagcgagcctcatatgcattca
atgcccgctattactgttcacccaaatacgaactggttcgcagctcagagtttagataat
cagattcttatttacagtacccgggagcggttccgcctaaacaagaagaagcgttttgct
gggcacatcgcagctggatatgcatgccaagtgaatttttcaccagacgggcggtttata
atgtcaggggatggtgagggtcgctgctggttttgggactggaaaacctgtaaagtgttt
cgcactcttaagtgccacgacagtgtgtgtattggggttgagtggcatcccttagagcag
tctaaggtggctacttgcggctgggatggcctcatcaaatactgggactaa
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