Physcomitrium patens (spreading earthmoss): 112282500
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Entry
112282500 CDS
T01041
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112282500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112282500
03032 DNA replication proteins [BR:
ppp03032
]
112282500
Spliceosome [BR:
ppp03041
]
Complex A
U1 snRNP components
Sm proteins
112282500
U2 snRNP components
112282500
Complex B
U1 snRNP components
112282500
U4/U6.U5 tri-snRNP components
112282500
Complex C
U2 snRNP components
112282500
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112282500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
Na_H_antiport_2
EBNA2_Core
YomU_Tube
Motif
Other DBs
NCBI-GeneID:
112282500
NCBI-ProteinID:
XP_024375906
UniProt:
A0A2K1KJY1
LinkDB
All DBs
Position
5:11333835..11335751
Genome browser
AA seq
176 aa
AA seq
DB search
MLLLSRCVAYARLLRLLLLRDRATDPAERFIAAFLHPEAAAAAANCASIKPCRHGVNNPV
VAMKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHMKSVKLTLKGKVPVALDHL
SIRGNNIRYYILPDSLNLDTLLVDDTPRVKSKKPVAGKPVGRGRGRGRGRGRGRGR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgctttcgcgttgcgttgcgtatgcccgtcttcttcgacttcttcttctgcgt
gatcgtgccactgacccagctgaacgcttcatcgctgcattcctccaccctgaagctgct
gctgctgcagccaattgcgcttctatcaagccgtgtcgtcacggggttaacaatccggta
gtcgccatgaagctcgtcagatttttgatgaaactgaacaatgagacggtatcgatagaa
ctaaaaaatggtaccattgtgcacggcactatcacaggagtggatatcagcatgaacacg
catatgaagtccgtcaaactcactttgaaggggaaggttcctgtggctctggatcatctc
agcatccgtggaaacaacatccgatattacatacttcctgacagtttgaatctcgacacg
cttcttgtggatgatacacctcgcgtgaaatccaagaagcctgttgctggcaaacctgtg
ggtagaggaagaggacgcggtcgtggcaggggacgtggacgtgggcgttaa
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integrated database retrieval system
