Physcomitrium patens (spreading earthmoss): 112282546
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Entry
112282546 CDS
T01041
Name
(RefSeq) squalene synthase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00100
Steroid biosynthesis
ppp00909
Sesquiterpenoid and triterpenoid biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112282546
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112282546
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppp01006
]
112282546
Enzymes [BR:
ppp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
112282546
Prenyltransferases [BR:
ppp01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112282546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
EarP
Motif
Other DBs
NCBI-GeneID:
112282546
NCBI-ProteinID:
XP_024376022
UniProt:
A9RRG4
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Position
5:complement(16697562..16704318)
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AA seq
406 aa
AA seq
DB search
MGIIGAILKNPEDLHHLLKLKMASAAANRAIPSDPNLAFCYQMLRRVSGSFSIVILQLEP
GLRNAVCVFYLVLRGLQAVEDDLTIPYDLKVELLRNLHKKIFDRDFHFPCGNNDYKLLMD
KFYLVILAFLGLTTGYQEVITEITERMGEGMVKYLNTEIISREDYNEYCHFSAGLMGLGL
TRIFYTAGMEQFTPDYLSNAMGLFLQKTNVIRDYLENINAQPTSRLRWPKEVWSKYADKP
EAFMDETNYKQGLHCLNEMVTDALSHGLDCLHYMAALQDQPNLRFCATFQITALGTLAMC
YNNVEVFRGSVRMRRGLTAKILDVKNMVDVYGAFYDFTRLIAAKIDKTDPSAVTTHKFVD
DIRSICRFEIKNRRAFTIESKFGHETFLVVALFVILVIMLLIVTKQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggggatcattggggcaattttgaagaatcccgaggacttgcaccatctgttaaagctg
aagatggcttcagcggcagcaaatagggctattccttcggaccccaatttggctttttgc
tatcaaatgctaagacgggtctctggaagcttttccattgttatattgcagctggagcct
gggcttcgcaacgctgtatgcgtgttttatttggttttgcgaggcctccaagctgttgaa
gacgatttgacaataccttatgatttgaaagttgaacttctgagaaaccttcataagaag
atctttgatcgcgattttcattttccttgtggaaataacgactacaagcttttgatggat
aagttttacttggtgattctcgccttcttggggctgacaaccggatatcaggaagtgatc
actgagattactgagcgaatgggcgagggcatggtgaagtatttgaacaccgagattatt
tctcgtgaggattacaacgaatactgtcacttcagtgccgggctcatgggtttgggtctc
acccgcattttttacactgctggaatggagcagtttactcctgattatctttcaaatgca
atgggcttgtttttgcagaaaacaaatgtgattagagattacctggaaaacatcaacgcc
caacccacatcgcgcttacgctggccaaaagaagtgtggtcgaagtatgctgacaagcct
gaggccttcatggatgaaacgaactacaagcaaggtttacactgtctgaacgagatggtg
actgatgctctctcacatggcttagattgtctacattacatggcagctttgcaggaccaa
ccaaatcttcgattctgtgccacttttcagattactgcgctaggaactctggccatgtgt
tataacaacgtggaagttttcaggggatctgtgagaatgagaagaggtttgacagccaaa
atcctagatgtgaagaacatggtcgatgtttatggcgcgttttacgacttcacccgccta
attgctgccaagattgacaagacagacccttctgctgtcacaactcacaagtttgtagat
gatatccgttcaatctgcagatttgaaatcaaaaacaggcgggctttcacgatagagagt
aaattcggacacgaaaccttcctggttgtggcgttgtttgttatactggtgattatgctt
ctgatcgtgacgaagcagtag
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