Physcomitrium patens (spreading earthmoss): 112282558
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Entry
112282558 CDS
T01041
Name
(RefSeq) eukaryotic initiation factor 4A-9 isoform X2
KO
K03257
translation initiation factor 4A
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112282558
03012 Translation factors [BR:
ppp03012
]
112282558
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112282558
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112282558
mRNA cycle factors
Stress granule specific factors
112282558
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
eIF-4
112282558
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112282558
Exosomal proteins of bladder cancer cells
112282558
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Ubiquitin_TPR1
Motif
Other DBs
NCBI-GeneID:
112282558
NCBI-ProteinID:
XP_024376063
LinkDB
All DBs
Position
5:complement(19926204..19929890)
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AA seq
413 aa
AA seq
DB search
MAGSAPEGSQFDARQYDAKMENILSGEGDDFISTWEEVHETFDVMGLHENLLRGIYAYGF
EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTREL
AQQIEKVMRALGDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRA
DSIKCFVLDEADEMLSRGFKDQIYDIFQLLPQKLQVGVFSATMPPEALEITRKFMNKPVK
ILVKRDELTLEGIKQFYVNVDREEWKLDTLCDLYETLAITQSVIFINTRRKVDWLTDKMR
ARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKEDERMLQDIQRFYNTVIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctggatctgcacccgaagggtctcagttcgatgctcgccaatatgacgccaagatg
gagaatatcttgagcggcgagggagatgatttcatttctacttgggaagaggtccacgag
acgtttgacgtcatgggtcttcacgagaaccttctcaggggtatatacgcctacggtttc
gagaagccgtccgccatccagcagcgtggaattgtccctttcacaaagggtctggatgtt
atccaacaagcccagtccggcacaggcaagaccgcgacattttgctctggtatcttgcag
cagttggactaccagcttttggagtgccaagctttggtgctggcacccacccgcgagttg
gcacagcagatcgaaaaggtgatgcgcgcccttggcgactacctgcaggtgaaggtacac
gcgtgcgtgggagggaccagtgtgagagaggaccagaggattttgcaggccggtgttcac
gttgtggtcggtacacctgggcgtgtgtacgacatgttgcgcaggaacgcactgcgcgcg
gactccatcaagtgctttgtgctggatgaggccgatgagatgctttctcgggggtttaag
gatcagatttacgacatctttcagctgctgccccagaagcttcaagtgggtgttttctct
gctaccatgcctcctgaagccctcgagatcacaaggaagttcatgaacaagccggtgaag
atcttggtgaagagagacgaattgactctggagggcatcaagcagttctacgtgaatgta
gaccgcgaggagtggaagttggacaccctgtgcgacctgtacgaaactttggcgatcacc
cagagtgtgatcttcatcaacacccgccggaaggtggactggttgactgacaagatgcgc
gctcgtgatcacaccgtgtcggctactcacggagacatggaccagaacacccgggatatc
atcatgcgtgagttccgctcaggatcttcccgggtgttgatcacaacggacctgttggcg
cgtggcattgatgtgcagcaggtgtctttggtgataaactacgacctgccaacccagccg
gagaattaccttcaccgtatcggtcgcagtgggcgattcgggcgtaagggagtggccatc
aattttgtgacgaaggaggatgagcgcatgctccaggatattcagaggttctacaacact
gtgattgaggagcttccatctaatgttgcggatcttctgtaa
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