Physcomitrium patens (spreading earthmoss): 112282580
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Entry
112282580 CDS
T01041
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112282580
04120 Ubiquitin mediated proteolysis
112282580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112282580
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
112282580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
COMMD1_N
HTH_34
Caenor_Her-1
Motif
Other DBs
NCBI-GeneID:
112282580
NCBI-ProteinID:
XP_024376109
UniProt:
A9T5R6
LinkDB
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Position
5:complement(10400777..10406604)
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AA seq
745 aa
AA seq
DB search
MTMNNERKVIELEQGWSFMQIGITKLKNLLEGVPEQQFSSEEYMLLYTTIYNMCTQKPPQ
DYSQQLYDGYRVSFEEYINSKVLPALREKHEEFMLKELVKRWYNHKIMVRWLSRFFNYLD
RYFIARRSLPALSEVGLICFRNLVYAETKINVKDAVVALIDREREGEQIDRALLKNVLGI
FVEIGMGNMDAYDTDFEQFMLEDTAAYYRRKASSWIQEDSCPDYMLKAEECLKREKERVG
HYLHASSEQKLLEKVQQELLTQYETQLLEKEHSGCHTLLRDDKVDDLSRMYRLFYRIPKG
LEPVASIFKQHVTEEGTALVKQAEDAVSNKRAEKKDTVGVQEQVFVRKVIELHDKYLQYV
SECFANHSLFHKALKEAFEVFCNKGVAGSTSAELLATFCDNLLKKGGSEKLSDEAIEDTL
EKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEG
MVTDLTLARENQSNFEDYLSDNTKSNPGIDLTVTVLTTGFWPSYKSSDLALPAEMVKCVE
VFKEFYQTKTKHRKLTWIYSLGTCNITGKFDAKPIELIVTTYQAAVLLLFNAEDRLSYND
IKNQLNLTDEDIVRLLHSLSCAKYKILNKDPNTKAVGQNDIFEFNTKFTDKMRRIKIPLP
PMDEKKKVIEDVDKDRRYAIDASIVRIMKSRKMLPHQQLVLECVEQLGRMFKPDFKVIKK
RVEDLIARDYLERDKDNPNMFKYVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaacaacgagcggaaggtaattgagttggagcaaggatggagcttcatgcag
atagggattacgaagctaaagaacctgttggagggcgtacccgagcagcagttcagctcc
gaggaatacatgttactttatacaacaatttacaatatgtgtacgcagaagcctccacag
gattattctcagcaactatatgacggatatagagtgtccttcgaggagtacatcaattca
aaggtgttgcccgcacttagagaaaaacacgaggagttcatgctcaaggagcttgtgaag
agatggtataatcacaaaattatggttagatggctgtcccggttttttaattacctagat
cggtacttcatcgccaggcggtctcttcctgcattgagcgaagtcggtctcatttgtttc
cgtaacctggtttatgcagagacgaagatcaatgtgaaagatgcggtcgtagctctgatt
gatcgtgagcgtgaaggcgagcagatagatcgggcacttctgaagaatgttcttggtatc
tttgttgaaattggaatgggcaacatggatgcatacgacacagactttgagcaattcatg
ctcgaagatactgctgcttactacaggaggaaggcctcgtcttggattcaagaagattca
tgtcctgactacatgctcaaggccgaggaatgcttgaaaagggagaaggaaagggttggg
cattacttgcatgctagtagtgagcaaaaattgctggagaaagttcagcaagaactcctt
acgcaatacgaaacacaattacttgagaaagagcattcaggctgtcatactctgttgagg
gatgataaggttgatgatctgtcaagaatgtatcggttattctacagaattccgaagggt
ttggaacctgtggcatccatttttaaacagcatgtcacagaggaaggaaccgcccttgtc
aaacaagctgaagatgcagtcagtaataagagggctgagaagaaagatacagttggagta
caagagcaggtctttgtgcgaaaggtgattgaattgcatgacaagtatctgcagtatgtc
agcgagtgttttgcgaatcattctctttttcacaaggcattgaaagaagcctttgaagtt
ttctgtaataagggtgttgcagggagtacaagtgcagagctcctggccacgttttgtgat
aatttattgaaaaagggtggaagcgaaaagctaagtgatgaagcaattgaggacacactt
gaaaaggtagtgaagcttcttgcgtatatcagtgacaaggacctgttcgcagagttttac
aggaaaaagctagctcgaaggttgcttttcgacaaaagcgctaacgacgatcatgagcgt
agcatcttgaccaagttgaaacagcagtgtggaggacagttcacttctaagatggagggc
atggtgacagatctgacccttgcacgcgagaatcaatcgaactttgaggactatttgtcg
gataataccaagtccaatccaggcatcgatttgacagtgacagtacttacaactggattt
tggcccagttataagtcttcagatctggccttaccggcagagatggttaaatgtgttgaa
gtattcaaggagttttaccaaacgaaaacgaagcatcggaaattgacttggatttactcc
ctgggaacatgtaacataactggaaagtttgatgccaagcctattgagcttattgtaaca
acatatcaggccgcagtgctattgctttttaatgccgaggataggctgagctacaatgat
atcaagaaccagctgaatcttactgatgaggatatagttagactgttgcactcattgtca
tgtgcgaagtacaagattcttaacaaagaccccaatactaaggccgtcggacaaaatgac
atctttgagtttaatactaagttcacggacaagatgagacggataaagattcctctgccg
ccaatggatgagaagaagaaggtgatagaggatgtggacaaggacaggcgatacgcaatc
gatgcatctattgtccggatcatgaaaagccgtaaaatgcttcctcatcagcaactggta
ctggaatgtgttgagcagctcgggcggatgttcaagcctgatttcaaggtgatcaagaag
cgagttgaggaccttatcgctcgtgattatttagagcgagacaaagacaaccctaatatg
ttcaaatatgtcgcgtaa
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