Physcomitrium patens (spreading earthmoss): 112282619
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Entry
112282619 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3 isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112282619
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112282619
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112282619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-ANAPC11
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
112282619
NCBI-ProteinID:
XP_024376221
LinkDB
All DBs
Position
5:complement(16044244..16049225)
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AA seq
374 aa
AA seq
DB search
MSSTWPPPWFDGFFLSMLATSVIVVLVNWQRYLLCRRPLHIWIVLITFSVQNFASCYNIP
AAEFMVDFRISSLKEATQMERMLRFKGRLFVLSVLSFVFYPFLWMWTILGSLWFSDTQGC
LPEEGQKWGFLIWLVFSYCGLVCLACITAGKWLLHRQSRLASPPNGQSAISEFQMFLEMI
RFPEWTSRHRTNAVMMRTNDLAVFPPGFVFSQGHNAHTLQATQRERVERAIQGLHKFSLS
RVAENWTQCPICLDDFDVGNEVRTLPCTHTFHVACIDAWLRLNVKCPHCRSSVFPELELD
RSNIPALPRLIPSRSRHFPSNHASDLNHGAVVVSIPRSQTDNPRPQAPRSTGGTGAHIMT
LADLASSSVRQTPR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcacgtggcctccaccttggttcgatgggttcttcctttctatgctggccact
agcgtgattgttgtactcgtgaattggcagcgatatctgttgtgtaggcgccctctgcac
atatggatagtgttaattactttttccgttcaaaattttgcatcttgttacaacattccc
gctgctgagtttatggtggactttcggatttcgtctctcaaagaggctactcaaatggaa
cgaatgttacggttcaagggtcgtttgtttgtgctctcagtgttatcatttgtattttac
ccgttcctatggatgtggacgattctcggaagtctctggttctctgatactcaaggatgt
ttgccagaggaagggcagaaatggggttttctcatctggttggtttttagctactgcgga
ttggtttgccttgcctgcatcacagctggaaaatggcttctgcatcggcagtctcgttta
gcttcacccccaaatgggcagagtgctatatcagaatttcagatgttcttagaaatgatc
cgtttcccagaatggacaagtagacacagaacgaatgcagtgatgatgagaaccaatgac
ttggcagtcttccccccaggcttcgtgtttagccaaggtcacaatgcccacacacttcaa
gccactcagagggaaagggtggaaagagcgatacaaggattacacaagttctctctgtca
agagtcgctgaaaactggacgcaatgccctatttgccttgatgacttcgacgtaggcaac
gaagtgcggactcttccttgcacccacacctttcatgtagcttgtatagacgcctggttg
agactgaatgtgaagtgtccccactgtcgttcttcagtgtttccagagctcgagcttgac
cgttccaacatacctgcactacctcgccttattccatcccgttcgagacattttcccagc
aatcatgcaagtgatctaaaccatggggcagttgtagtttcgataccaagatcccaaact
gataatccaagaccacaggcacccagaagtactggaggtacaggtgcccacattatgacc
cttgccgacttggcttcgagttctgttcggcaaactcctcgctaa
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