Physcomitrium patens (spreading earthmoss): 112282637
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Entry
112282637 CDS
T01041
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112282637
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112282637
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112282637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
HHH_5
AAA_22
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
112282637
NCBI-ProteinID:
XP_024376282
LinkDB
All DBs
Position
5:2585266..2597161
Genome browser
AA seq
1518 aa
AA seq
DB search
MDPRLDPDYLKPVSLLPTAFQSVFPFRYFNAVQSESFAEVFLSDDNLVISAPTGSGKTVL
FELCILRLLEKFLTTEGHFKHVSGARKAVYIAPMKALVQDKLRDWTLRFSSLGVKCQELT
GDSGPTNVGEMIDTDIILTTPEKFDVITRRHRDRGGMSFFGDIALILIDEVHLLSETRGA
ALEAVVSRLKMLARFPEIKGSPLSTIRFVAVSATVPNIEDLAEWLHVPKNGMKRLYSPTA
GLTCDSFEFRFGEEYRPVKLTTTVLGYQPAKNDFLFERRLQQYLLDILLHHSEGKPSLVF
CSTRKGAQDTAVALSQSVSQHGNHNPFVKNLEHFKRLQLAAQRTNDVHMQQCIRSGVGYH
NGGLSMEDRGLIEGLFLTGDLLVLCTTSTLAQGVNLPAHAVIIKSTQYYNKLKGCYVEYE
RSAILQMSGRAGRPQFDDSGVVVIMTRKDSVHLYHNLLSGSEPVESQLLSSIVEHLNAEI
VLMTVSDCSQAIDWLKCSYLYVRIKKNPQYYCVKQGVPRDQLENKLKDICVQNVNELAKY
GMVKTDEFGYVLTPLEPGRIMEKYYMQFETMKAITKAAERATIEELLHVLANAAELSWIK
LRRDEKKRLNDINGDISGRIRYHVNNSNGKLKKRIQSGAEKIFILVNDALSGEPSVTDFT
MSQDINGICTTGTRICRCMSEYFIFMKRFTEIRNALLLSKCLKQRLWESTKYQLKQLVGV
GLVTAKALITAGVDSFEKLASADPRRLEAITGRKFPYGDQLKASLNDAPPKVEMNLFESE
RDDQCLLTLHRVSQSQSSGKNFHMAELVVGSMADNMLIFRERIRMDQFTSPYAVTITSSS
PSDEPLVLVAALISEEYVGVDVVCKLVINRDSRDDQLGLNEDYRHQGPQTSMTRFYISSP
FKASFSINDLAASSARSHATSVMSSPLIKNKTLDSPRAQQTAASNIPIMEALSRYPSRHS
NPCPATLATRNFLNKIGTDIDASDPLKDTFLRTLPIPAKTESNTTPGSEVLATCVIKPSK
SPSSKSGHADHFDILTTLQSSDLVETSICNSVLVPTETYEKSPRTSSFVTPKRKDPPSCA
PRRLFRRLCTRFEENRMTTSLPSANGKTPNPSQSEEVSIKSTMCNGGPCSMNDIGFTENY
ADQATTSIPRNDCGSEKSTKVTTLLYNSKVRTHDNVELQAGVVSDMTHQDSGPSEDVTAS
APPSLTSLSTTPDLLSSDMRRKIRRTGFSSISCFSSVKNNDQRNSMVTLNIAQPSSCQPR
CPDRSDEPQNIKHRSRILQSFPSRAPRVTDAVAQNSPHSKVSDQLTPWRATAGLIPTGSR
SEAEAESDLTNTETISNSCQQKTLWRSLDNNHLTKTNCVGAAKERNSFSQGPNNIKITSS
TRRYTASRLEAASCALIDRPLKQIAPYKALKSFDFGSSRKPPPDVARGVNPASEIPEPLD
QAASISNTRLKAEDLGFVTVEVPSNHNSSTKKFSCLRFDQSHITARSSSSALGESTTAQP
SPAGQHEFMGYKSLFSFL
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgtctcgatcccgactatttgaagcccgtttcgcttttgccaacagctttt
caaagtgtctttccttttagatatttcaacgctgttcagagtgaaagttttgctgaagtt
ttcctctcagatgacaacttagtaatctctgctcccactggcagcggaaagaccgtcctg
ttcgagctatgtatcctaaggcttctagagaaatttttgacgaccgaaggtcacttcaag
catgtttctggtgctcgaaaagctgtatacattgcaccaatgaaggctcttgtgcaagac
aagctccgagactggactctgaggttcagctctttgggcgtaaaatgtcaggagttaacc
ggtgactcaggaccaacaaatgttggagaaatgatagatacagatatcatactgaccact
cctgagaaattcgatgtcattactcggagacatcgtgaccgtggaggaatgagctttttc
ggagacattgcccttatcttgattgacgaagtccaccttctctctgaaactcgcggtgca
gcccttgaagcagttgtgagcaggctgaagatgttggctcggtttcccgaaataaaggga
tccccactatcaactatacgctttgttgcagtttcagcgacagttccaaacattgaagat
ttggcggaatggttgcatgtacccaaaaatggcatgaaaagattatattctccaaccgct
ggacttacgtgcgactcgtttgagttcagatttggggaagaataccggccagtgaaactc
acaactaccgttcttgggtaccagcctgccaagaacgatttcttgtttgaaaggagactt
cagcaataccttttagatatattattgcatcattcggaaggaaagccatcgcttgtgttc
tgctcaactagaaaaggagcacaagacactgcagttgccctgtctcaatccgtgtcacaa
catggcaatcataatccctttgtcaagaacttggagcactttaaacgactacaattggca
gcccagaggacaaatgatgtgcatatgcagcagtgcatacgcagtggagttgggtatcac
aatggtggactttcaatggaggacagaggtcttatcgaagggctatttctaacgggagat
cttttagtgctttgtacgacaagcacattagcacagggtgtaaatctgccagctcatgca
gttattatcaagtctactcagtattataacaagctcaaaggttgctatgtcgagtacgaa
cgttcggcaatattacagatgagtgggcgagcaggtagaccacaatttgacgatagtggc
gtggtcgttataatgacgagaaaagatagtgtacatttgtaccataatctgctatctggg
tcggaaccagtggagtctcagctactctcttccattgtggagcatttgaatgcggagata
gtgctcatgactgtatctgattgtagtcaagctattgactggcttaaatgttcatacctt
tacgtgcgcatcaagaagaatccacaatattactgcgtcaagcaaggagttccacgagac
cagcttgaaaacaagttaaaggacatctgtgtgcagaatgtgaacgagcttgcaaagtat
ggcatggttaagacagacgagtttggttatgttttaacaccactagaacctggacggatc
atggagaagtactatatgcagtttgagacaatgaaagccattacaaaagctgcagagaga
gcgacaatagaggaacttcttcatgttttggccaacgctgccgagctgtcatggatcaag
cttcgacgggatgagaaaaaaagattgaatgatattaacggggacattagtggaagaatc
agataccatgtcaacaactcaaacgggaagttgaaaaaaagaatacaatcaggagcagag
aagatatttatactagtgaatgatgctctttctggcgagccttctgtcacggacttcaca
atgagtcaggacattaatggaatttgtacgactggcactcgcatatgtcggtgcatgagc
gaatacttcatcttcatgaaaaggttcacagagatacgaaacgcgcttctactatccaaa
tgcctgaagcagcgactctgggaaagtacaaagtatcagcttaaacaacttgttggcgtg
ggcctggtcacggctaaggctctaatcacagctggtgtagattctttcgagaagttagct
agtgctgatcctcgacgattggaggctattactggacggaagtttccatatggagatcaa
ctgaaagcgtctttgaatgatgctccaccgaaggtcgaaatgaatctatttgaaagtgaa
agagatgatcagtgccttcttacactccatcgagtgtcacaatcacagtcatcaggaaag
aactttcacatggccgaattggtggtgggaagtatggctgataacatgttaatatttcgt
gaaagaatcagaatggatcaatttacgagtccatatgcagtgactattacatccagttca
ccctcagatgagccgcttgtgcttgttgctgctctcatttctgaggaatacgttggagtt
gacgttgtttgcaaattagtcatcaacagagattctagggatgaccagctgggcttgaat
gaagattacagacaccaagggccacaaacttctatgacacgtttctacatatcttcccca
tttaaagcatccttcagtattaatgatctagccgcttcaagtgcgcgaagtcatgcaact
tctgtgatgtctagccctttaattaaaaataaaacgctagatagtcctcgagcacaacaa
acagctgcctccaatatacccatcatggaagctctcagtcgttatccttcaagacattca
aacccttgtccagcgaccttagctacgagaaattttctgaacaagatcggcacagacatc
gatgcatctgatcctttgaaagacactttcctgagaaccctaccaattcccgcgaagacg
gaatcaaatacgacacctggatcagaagtcctagcaacttgtgtgataaagccttcgaag
tctccctccagcaagtctggtcatgcagatcactttgatatcttgaccacgctccaatca
agtgaccttgttgagacctcgatttgcaactctgtgctcgtgccaactgaaacgtatgag
aagtctcccaggacatcttcatttgtaactcctaaacgaaaagatccacccagctgtgcc
ccgagaagactttttcgtagattatgtaccagatttgaagaaaatcgtatgacgacctca
ctgccctcggcgaatggcaagacaccaaatccttcacagagtgaagaagtgtctatcaag
tctacaatgtgcaatggaggaccatgttctatgaatgacataggtttcaccgagaattat
gcggatcaagccacaacctctatccccaggaacgactgcggtagtgaaaaatcaacaaaa
gttacaacgcttttgtacaatagtaaggtaagaacacatgacaatgttgagttgcaggca
ggggtcgtgtcagacatgactcaccaggattctgggccatccgaagatgtaacagcttca
gctccaccctctttgacgagcttatcaactacaccagatcttctatcgtctgatatgagg
agaaagattcgaagaactggattttcaagcatttcatgcttttcctctgttaaaaataat
gatcaaagaaattctatggtgacgcttaacatcgcgcagccttctagttgtcaaccccga
tgtcctgatagaagtgatgaacctcagaatattaaacatcgttccaggattttacaatct
ttccctagtagggctcctagagtcactgatgcagttgctcaaaattctcctcacagcaag
gtttctgatcagttaaccccgtggagagcaactgcggggcttattcccactggtagtaga
tctgaagccgaagcagaatctgacttgacaaatacagaaaccatatccaattcatgtcag
cagaaaacgttatggagatctcttgataataatcatttaactaaaacgaattgtgttgga
gcggccaaggagcgaaactcgttttcacaaggtccgaataatatcaaaataacaagctcc
actcgaaggtataccgcatcgagattagaagctgcatcatgcgcccttattgatagacct
ttaaagcaaatagctccttacaaggctttaaaaagctttgattttggatcttcgcggaaa
cctccgcccgacgttgccaggggtgtgaatcctgcatcagagattcctgagcctttagat
caagcagcttcaatcagtaacacgaggctgaaagctgaggatttgggcttcgtgacagtt
gaagtaccttccaaccacaattcttccactaagaaattcagctgcctcagatttgaccaa
tctcacatcacagccagatcttcaagttcggcgttaggggaatccactacagcgcaacct
tcgccggctggccagcatgagttcatgggctacaagagcctcttctcattcctttga
DBGET
integrated database retrieval system
