Physcomitrium patens (spreading earthmoss): 112282643
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Entry
112282643 CDS
T01041
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112282643
03036 Chromosome and associated proteins [BR:
ppp03036
]
112282643
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112282643
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112282643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HTH_44
Tex_central_region
HHH_9
SH2
HHH_3
S1_RRP5
Tex_N
S1
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
112282643
NCBI-ProteinID:
XP_024376317
UniProt:
A0A2K1KKV4
LinkDB
All DBs
Position
5:16767671..16776977
Genome browser
AA seq
1620 aa
AA seq
DB search
MADSGDEDEEEYEEEGQDEYEKDGFIVDEEEEEEEEPEEEPQESSDEDSKAKKKKRKKRG
EETYELDEDDYDLLQEANVTGFHRPPKADGKTKFKRLKKGGIGGEKGSGGIGLSDDDEEE
DGGGRRGRTAEEELKRSLFGEDDGAAAEDVVEEEELDDEEEVDEDEMADFIVDEEEEEVD
EHGEPSKHRKKKKKVKRKDFRQAPGINSIALQEAQEIFGDVTSLLEERRRRERDTLAGVD
DEDRVDDDDDDGYGRSRKPPSQKLLEKQFEPSLLEEKFLTERDDRLRETDVPERLQILEE
AVGALPTSDSAIRQAAEWIYDRAFGHLAVPVRPEFRHLSRDRDLISRQIANVLHLIHDDK
FEIPFIAMYRREECFDLLKEASDDYEDEERPLVRTYAALWAVQQWDKKWLLLQRRKTALQ
AAYEKRIPSDIRDDPEKDELVDKILRALADAQADQAVDDCDAKFNLHFPPDEVEIVDGGF
KRPKRRSLYSICRKGGLGVVAKEFGLAPDLFGENLQATYKRHDVEDKPISPEELAARFCS
TNRPANEFWDVRSVLRGARHMVAVEISTEPAVREYVRGIYAERAVVSTRPTPDGNDAIDS
FHQYAGVKWLLNKPIGAFDDAQWLLIEKAAEEKLLTVTVSLPKEPIATLMQDCETLYLSD
GVSLTAQQWNEHRKQILHDAVVTLLLPAMEKEARMVLTTRAKQWLSAQCGLQLWSKVSIA
PYVPPKAGDQDERIDDGPALRVLSCCWGPGNPATTFVMLDAAGEVMNVLHTGYLNMRATS
AEQKKRKENDQDRLLQFMREYQPHVVVLGAANLQCRHLSQDIFEVIFKVVEEHPRDLAEG
LDMIKVVFGDETIPSLYENSRVSQEQLPGQPGIVRRAVALGRFLQNPVTMVASLCGPTKE
ILSLRLHPMQNSLTNEELYEAVERVMVTVVNQVGIDINLAASHDWIFGPLQFVAGLGPRK
AGAIQRAIQSAGRVGTRKDLYSSIRVMDRKVFINSAGFIRVRGSGQAASGMQHLDPLDDT
RIHPESYQIAKNMAEAAFKEEAIQNDEEVDEDMLEMAVEHVMTNPVVLDTMDVEEYARST
QGRGQGRKIPTLRLIKSELQHGFRDWRKPYAEPSEEEKFYMLSGETEETLSCGRIVNATV
RNVQQNRVMCVLESGLLAFIQKEDLSDDRDVEPSDKVSEGSIVTCRVKEVKLAKFLVDLT
CKGSDLRAEHWRPRVQPDPYYQPDTTFLQREQDKVRKKKEEEKKKAFKPRMIVHPYFQNV
SIDDAMKALAEKDIGDFIIRPSSRGPTHLSMTLKIHDGVFTHIDIAEGGKESRDLTSFLS
LGKTLTIGEESYEDLDEVIARYVEPLVGYLREMLRYRKYKQGTKNEIDDLLRAERAANPK
RIPYYFSVAHEHPGAFMLSYIRAVNPHHEYISLSAKGFRYRKHNFENIDKLVAYFQKHFN
DPLPEAPRRAVAAMVAPRSPSSYSVGSYGYSAGSRRPSESGASGFDSRNSQWGDSRAGGG
GWGSSSGWGSRGNSGWDKAVVRPSGDNRGSTSNWGPEPSPRNNWDKNGGAGRSAWDNSQP
GAPSQWDNVTNSEGGAAGDGWAAVPGATPTSGSGWDAVPGATPTSGSGWMPGGHAGPRGF
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccggggacgaagatgaggaggagtacgaggaggagggtcaggatgaatac
gagaaagatggatttattgttgatgaagaagaggaggaggaagaggagcctgaagaagaa
ccacaggagagtagcgacgaggactcgaaagccaagaaaaaaaagcgcaagaaaagagga
gaagagacatatgagctcgacgaagatgattacgatctgttgcaagaagcaaacgttact
ggctttcatcgacctcccaaagcagatggaaagacgaaatttaaacggctcaagaagggt
ggaattggtggagaaaaagggtctggtggcattggattgtcagacgacgacgaagaggaa
gatggaggtggtaggagaggtcgcacagcagaggaggagcttaagaggtctttgtttgga
gaagacgatggggctgcagcggaggacgtggttgaagaggaagaactggacgatgaagag
gaagtcgacgaagatgagatggctgatttcattgtggacgaagaagaagaagaagttgac
gagcatggagagccttccaaacacaggaagaagaaaaaaaaggtgaagagaaaagacttc
aggcaagctccaggaataaattcaatagccctgcaagaggctcaggaaattttcggagat
gtaacttcattgttggaggagagaagaagacgcgaaagggatacattagctggtgtagat
gacgaggatagagttgatgacgacgacgacgacgggtatggccggagccgaaagccgcca
agtcagaaactgttggagaaacagtttgaaccaagtttgctggaagaaaagttcttaaca
gaaagggacgatcgtttacgagagacagatgtgcctgaaagacttcagattctggaagag
gcagttggtgccttgcctacttcggactcggcaataagacaggctgctgaatggatttat
gatagagcatttggccaccttgcagtgccagttcgccctgaatttcggcacctttccagg
gatagagatcttatttcgaggcaaattgctaacgtcttgcatctaatacatgatgataaa
tttgagattccgtttattgcaatgtatcggcgagaagagtgctttgatcttctgaaagag
gcttcggatgattatgaagacgaagaaaggccattagttcgtacttatgcggcactctgg
gcagttcaacaatgggacaagaagtggctactactgcagcgccggaagacggcacttcaa
gctgcttatgagaagcgcattccttcagatattagagacgacccggaaaaagacgagctt
gttgataaaattcttcgtgcactggcagatgcccaggcagaccaagctgttgatgattgt
gatgccaagttcaatctacactttccccctgatgaagttgagattgtggacggtgggttc
aagcgtccaaagagacggtccctctacagtatttgccgtaaaggtggtctaggtgttgtt
gcgaaggaatttggattggcccctgacctgtttggagagaatctgcaggctacttacaag
aggcatgatgtcgaagacaagcctatttctccagaagagcttgctgccaggttttgttca
acgaatagaccggcaaatgagttttgggacgttcgatctgtattgcggggtgctagacac
atggtagctgttgaaatcagtacagagcctgcagtgcgtgagtatgttcggggtatctat
gctgagagggctgtggtcagcacacgacctactccagatgggaacgatgcgattgactcg
ttccatcagtacgctggtgtgaaatggctattgaacaagccaattggtgctttcgatgat
gcccagtggttgctaattgagaaagctgcggaagagaagcttcttacggtcacagttagc
ttaccaaaagagcctattgcgactctgatgcaagactgtgagaccttatatttgagtgat
ggtgtgagccttacagcgcagcagtggaatgaacacagaaagcagattttgcatgatgct
gtggtgacgcttttgcttccagccatggagaaagaggctcgcatggtactaacaacaagg
gcaaagcagtggctgtcagcacagtgtggtttgcagctatggagtaaagtttccattgct
ccatatgttcctccaaaggctggtgatcaagatgaaaggattgatgatggtcctgcgctg
cgggtgctatcatgttgttggggcccaggcaacccagcgactacttttgtaatgctagat
gcagctggggaggttatgaacgttttgcatactgggtatctgaacatgagggctacgagt
gccgaacaaaagaagaggaaggaaaacgaccaagatcgcctgcttcagttcatgcgagaa
taccaaccccatgttgttgtcttgggtgctgcaaatttgcagtgtcgtcatttaagccag
gacatttttgaagtgatttttaaggtggttgaggagcatccccgggatttagcagaaggg
ctggatatgattaaggtggtgtttggagatgagaccattccttctctgtacgagaattca
agagtttctcaagagcagcttcctgggcagcctggcatagtgagacgagcagttgccttg
ggccggtttttgcaaaaccctgtgaccatggttgcttctctatgcggcccaacaaaggaa
attctctcattaagattgcaccctatgcaaaattccttgacaaatgaggagttatatgaa
gctgttgaacgtgttatggttactgtggtgaaccaggttggcatcgacatcaatttggca
gcctcacatgattggatttttggccctcttcaattcgttgcaggtcttggccctcgcaaa
gctggggccattcagagagccatccaaagtgctgggcgtgtagggacgcgcaaagatctc
tattcaagtatacgggttatggacagaaaggttttcataaactctgcaggtttcatccga
gttcgaggcagtgggcaagcagcttcggggatgcagcatttagacccacttgatgatact
cgtattcatcctgaatcatatcagattgcgaagaacatggcagaggctgcttttaaagaa
gaggccatacaaaatgatgaagaggttgatgaggatatgctggaaatggctgtggagcac
gttatgacaaatcctgttgtcttagacaccatggatgtagaggaatatgctcgtagtaca
caaggtcgtggacaaggtcgaaagattcctacactcaggctgatcaaatcagagcttcaa
cacggatttcgggactggcgcaagccatatgcggagccatctgaagaggagaagttctat
atgttgagtggagaaactgaagaaactttgtcctgtggtcgcattgtgaatgcgactgtg
aggaatgtgcaacagaaccgagtcatgtgtgtcttggaatctgggttactagcgttcata
cagaaagaggatctttctgatgatcgtgatgtggaacccagtgacaaagtctcagaaggc
agtattgtgacttgtcgggtaaaagaagtgaagttagccaaatttttagtggatttgacc
tgcaaagggagtgatctcagagcggaacattggcgccccagggtgcaacctgatccgtac
tatcaacccgacaccacattcttacaaagggaacaggacaaggttcgcaagaagaaagaa
gaggagaaaaagaaggccttcaagcctcgcatgattgttcacccatattttcagaacgtc
tctattgatgatgcgatgaaggcactggctgagaaggacattggtgattttattattcgt
cccagtagcaggggtccaacccatctgtctatgacattgaaaatccatgatggtgtgttc
acacatatagatattgctgagggaggcaaggagagtcgcgatcttacaagctttctgagt
ctcggcaagacacttactattggagaagaatcttacgaagatcttgatgaggtaattgcc
agatatgttgaacctttagttggatatctgcgtgagatgctgcggtatcgaaagtataaa
caagggaccaagaatgaaattgatgatctactacgtgctgaaagagcggcaaatcccaag
cgtattccatattatttctctgtagcccacgagcatcctggggccttcatgctttcctat
atacgggctgtaaatcctcaccacgagtacatatcactatctgctaagggttttcgttat
cggaagcataatttcgagaacattgataagcttgttgcttacttccaaaaacattttaac
gatcctctaccagaagctcccagaagagcagttgctgctatggttgctcctcgaagccct
agtagctatagtgtaggtagttatggatatagtgcaggctctaggaggccttctgagtcg
ggtgcctctggctttgattcaagaaacagtcagtggggagattccagggctggcggtgga
ggctggggcagcagttcagggtggggtagtcgtgggaattctggatgggacaaggcagtt
gttcgtccaagtggagacaatagggggagtacaagtaactggggccctgaaccttctcct
aggaataattgggataagaatggaggggccgggaggagtgcttgggacaattctcaaccc
ggcgccccatctcaatgggacaatgtgaccaattcggaaggtggcgcagcaggggatgga
tgggctgctgttcctggtgctactccaacatctggatctggatgggatgctgttccagga
gctaccccaacatctggatctggatggatgccaggtggccacgctggaccacggggattt
taa
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