Physcomitrium patens (spreading earthmoss): 112282736
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Entry
112282736 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112282736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppp02000
]
112282736
Transporters [BR:
ppp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
112282736
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
AAA_15
AAA_29
RsgA_GTPase
MukB
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
112282736
NCBI-ProteinID:
XP_024376522
LinkDB
All DBs
Position
5:14908228..14918850
Genome browser
AA seq
1854 aa
AA seq
DB search
MPNFFGAMATGVEMMERDQGAALLGDYSPRSAKSGRRSMSLEEKRALPPVRGQDQLQALL
RRQWLHKLQRRGWQQTIMEILSPLLLMTLLVWGWSRSVEETHVAEIFVNHTLPISFMLKE
NMLSNSKSLLQLCPPSLLAQQQLSPEELRRLVELIRLKVGHSFGGTLFHNLTSKPSSTIT
NIQSMSPALAVLSLQCVESAMQITTVIKSFDAYNGPLPVPSFDAFVQAHLLLKRTLKAGE
GKQFEDALRAQRLFGNVLGNLLQLGCITFVPDTPEVTALVEYLTTSTEFFKDVYGGIFQS
EKDAEKHALTSVQLERPTWAIIVVEHLDIVGGNVDYKIRMNFTTVPSTWDTLHKRRKGLL
SYYKRYYTSGFLSLQDAINGYVLQLAPKQKQADLFTHKPMWAAPFPTPAHMRNKFFHKVG
PLLEIMLCFTAFYPLGMFVKGMVEDKESRAKQTMLTMGLKPWVFSVSWHMTYLATFMLNS
ICMTILMSMTIFHRSDPSLLFVMYFFFTTSLISFGFFLSVFFSRSKLAAIAAIFSLFAAL
MPRYLFFRTSNGQAIVGKTIASLLPPTAYAFGVDLVAHYEGSGYGLTWADIGEDGFSIWR
VLMLLLADSVLYILLAWYLEQVIPSGYAARQSPWFLFSPSYWHKCAGNNHTDTYQKLSTT
DEMDDIVEGDIEPLFSSGDEAAIRIEGLRKVYNDGKVAVTGLCLDFFENNVTALLGHNGA
GKSTTISMLTGMIQPTSGDAKILGYSILSNMNDVRRIIGFCPQQNVLFGYLTVKEHLELY
AAVKGVPRHSIPLVVGDMIVSLELKGKTETRVACLSGGMQRKLQVGLAMIGDSRVVFLDE
PTCGLDPQSRRSVWDLLRSFKHGRAIVLTTHYMDEADLLCDRIAIMSEGRLRCCGTSLFL
KSKFGVGYNLRMTRNNLSSSDATAVAALVKHYVPQAIPLSSAGGEISFQLPSSNKAAFSQ
LFQELEGKLGAFSVSSYGVSMTTLEEVFLRLADNDESPLKHQKHCIPPNDLPSTFTVEIP
SCKPSFSIEKRKRSRTRAFKQMFLKRAIIAKRDMKAFANSVLLPVVAIGLVMLIMKLNID
PAGPQLQINFDMYSRTVTGRKEFPPVAVIPVAGPIPSNYLPLQGGSKFVRFDPDDAVNNS
IQISQQLLSSLFCVPARFGAVVINDTLWPRTNFTSQQTDETIGKLWKSYKAETGNGLSSA
VTLMYNTTSDHSFPALIQELAQMTFRARTKNASATLHMSSHPLPLTKNEALLVQNILTGL
AALFTLIPLSYCAASFAVFVVQEREVKAKLLQMVSGASTFSYWAAAYVWDMLTYLIIVST
TMLVLVLYKDQSFTGSWAKASAAIALLIAFGLAVVPLTYCYSFAFSNHANAQVAIAGIHL
ITGFGALGSNILLASLENTKVLSERLILVYQFFPPYNLGKGLANLAALDLESTMDGRPSN
PCRWDVTGHSLALMLVEAVGFACLTLIIDSSSWLPSWLSFTAHSTSKPSMYLEVNTIEED
DDVRTERQRVEGGLAAKDTVVVYKLNKMYPGQGVDEAKVAVRNLSLGIPPGQCFGFLGVN
GAGKTTTLSILSGDTKPTSGDVFITGNSVLSKLPASQKQIGYCPQFNPLLDLMTAREHLH
MYASLKGVPSQSVRKVVTDLVQAVGLEKYVDQLAGSYSGGNKRKLALCIAMIGDPAVLFL
DEPSSGMDPVTRRAMWNLILNAVVEKNMSAVLTTHSMEECEALCGRVGVMVAGSLVCLGS
VQHIKSQFGQGYTVELQCSRAASLTDLHHFMKSEFPGSVLEEERMLRVKYSLPRNSHSLS
HVFSSLEKAKYDLDLDDYSVSQSTLEQIFLSMASDRNVDRAQRPMKSDTHVCEV
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgcccaattttttcggtgcgatggccaccggagtggagatgatggagagggaccaagga
gcggcgctgcttggagactacagtccccgatctgcaaaatctggtcgcagatcgatgtca
ttggaagagaagcgtgcattgccgccggttcgagggcaagatcaactgcaagcattgcta
cgccgtcagtggcttcacaagttgcagagaaggggatggcagcaaaccatcatggagata
ctcagtccgctgctactgatgactctgctggtatggggttggtcccgcagcgtggaagaa
acccacgttgccgaaattttcgtcaatcacacgttgccaatttctttcatgctcaaagag
aacatgttatccaattccaaaagcctcctgcagctgtgtcctcccagcttgcttgcccag
cagcaactttcacccgaggagctacgccgtctagttgagctaattcggctaaaagttggg
cactcctttgggggaaccctgtttcacaacctcaccagcaaaccctcgtccacaatcact
aatatacagtcaatgtcacctgcattggcggttctcagccttcaatgtgtcgaatccgca
atgcaaatcactactgtcattaaatccttcgacgcttacaatgggcccttgcctgtgccc
tccttcgatgccttcgttcaggctcatttgctcctcaaacgaactctgaaggctggtgaa
ggaaagcaattcgaggacgcactgcgcgcacagcgattgttcggcaatgtccttggaaat
ctactacagctggggtgcattacatttgtacctgacacaccagaggttaccgcccttgtg
gagtatttgaccacttcaaccgagttttttaaagacgtctacggtggcatcttccaaagt
gaaaaggatgctgagaaacacgcacttacatcagtgcaactggagaggccaacatgggcc
ataattgtggtggagcatttagatattgtgggcggaaatgttgactacaaaatacgaatg
aatttcacgacagttccatccacttgggatacacttcacaaacggcggaagggactcctc
agctactacaaacgttactatacttcagggtttctcagcttacaggatgcaatcaatggt
tatgttcttcagcttgccccgaagcagaaacaagcggatctgttcacccacaaacctatg
tgggctgctccgtttccaacacctgcacacatgcgtaacaagttcttccataaagttgga
ccattgctggagatcatgttgtgcttcactgctttttaccctcttggtatgtttgttaag
ggtatggtggaggacaaggagagcagggctaaacagacaatgctaacaatggggttaaaa
ccttgggtattttctgtgtcttggcacatgacttatttggctacttttatgctgaattcg
atatgcatgacaatactcatgtctatgacaattttccatagaagtgatccgagtctacta
ttcgtcatgtattttttcttcaccacatcgttgatttcctttggcttttttttgtcggtg
ttcttctcaagatccaagcttgcagcaattgcggcgatattctccctctttgctgcattg
atgccacgatatctcttcttccggacaagcaatggacaagccattgtggggaaaactata
gcttcattactgccccccacagcatatgcctttggagtggatcttgtggcacactatgaa
ggaagtggctatggtctaacatgggcagatattggagaagatgggttttccatttggaga
gttctcatgcttttgctggcagactcagtgctatacatattattggcttggtacttggaa
caagtgattccatcaggatacgcggcacgacaatctccatggttcctcttttcgccttcc
tactggcacaaatgtgcagggaacaaccacactgatacttaccagaaattgagcaccaca
gatgagatggacgacattgttgaaggtgacattgagccattattttcaagcggcgacgag
gcagcaatacgcatcgagggtctgcgaaaagtgtacaatgatggaaaagttgcagtgact
ggtctttgcttggacttcttcgagaacaatgttacggctctcttaggtcacaacggagct
gggaagagtaccactatatccatgcttacgggtatgatccagcccacaagtggagatgca
aaaatcttgggttacagcattttgagcaacatgaatgacgttcgaaggatcattggattt
tgccctcaacaaaatgttctcttcggctacttgaccgtgaaggaacatctggaattgtat
gctgctgtgaaaggggtccccagacattctatccctcttgttgtgggcgacatgattgtg
agtctcgaattaaagggaaaaaccgaaacgcgcgtagcttgtctttccggaggcatgcaa
cgaaagctgcaggtggggctagctatgataggggactcaagagtagtgtttctggatgag
cccacatgtggtttagatccccagtcaagacgcagtgtgtgggaccttctaagaagcttc
aaacatggccgagccattgtcctcaccacacactacatggacgaggctgatttattgtgc
gaccgtatcgccatcatgagcgagggccgacttcgctgttgcggtaccagtctctttctc
aaatcaaagtttggcgttgggtacaacctccgtatgacacgtaacaatctttcctctagt
gatgctacggctgtggcggcgctggtgaagcactatgttccgcaagcaatccctctcagc
tcagcaggtggggagatctctttccagttaccaagctccaacaaagctgcgttttcgcag
ctgtttcaagaattagaaggaaaactgggtgctttctccgttagcagctatggtgtctca
atgactacgttggaggaggttttcctacgattagcagacaatgacgaaagtcctttgaaa
caccaaaaacactgtattcccccaaatgacttaccgagtacattcactgttgaaatcccc
tcatgtaaaccatcattctcaattgagaagaggaagaggagccgcactcgtgcatttaag
cagatgtttttgaagcgtgccattattgcaaagcgcgacatgaaggcatttgccaattcc
gtacttctcccagttgttgccattggtcttgttatgctgattatgaagctcaatatcgac
ccagctggacctcaattgcagatcaattttgatatgtatagtagaactgtgacgggaaga
aaggaattccctccagtggcagtaattcccgtagctggacccataccttccaactatttg
ccccttcaaggtggaagtaaatttgtaagatttgacccagatgatgcagtgaacaacagc
atccagataagccaacagcttctaagctctctgttctgtgtaccagctcgatttggagct
gtagtcatcaacgacacattatggccaaggaccaatttcacttcccaacaaaccgatgaa
accattggaaagctttggaagtcgtataaagctgaaactggaaatggcctttcgagcgct
gtgactcttatgtataatacaacatcagatcactcctttccagctttgattcaagagttg
gctcaaatgacatttcgggcaagaacgaagaatgcctcagctactttgcacatgtcaagc
caccctttacctcttaccaagaatgaggcacttcttgttcaaaacatcttgacaggattg
gctgctctttttacactcatcccattgtcctattgtgccgcaagctttgctgtcttcgtg
gttcaggaacgggaggtcaaggctaagctattgcagatggtgagtggagcatccacgttt
tcatactgggcagcggcgtatgtatgggacatgttaacatatttaattatagtgagcacc
actatgttggtgctagtgttatacaaagaccagtccttcacagggtcttgggcaaaagca
agtgctgctattgcactgcttattgccttcggtttggcagtcgttcccctcacttactgc
tattcgtttgccttttccaatcatgccaatgcccaggtagcgatagcaggaattcacttg
atcactggttttggagcgcttggaagcaatattctcctggcttctctagagaacaccaag
gttttgagtgagcgtctgatcctggtgtaccagttctttccaccatacaacttgggaaaa
gggcttgctaatttagctgctctggatctggagagcaccatggacggacgtccgagtaat
ccttgtcgttgggatgttaccggtcactcgctagcgttgatgctggtggaggctgtgggc
tttgcctgtctcacacttatcatagattctagctcttggttaccctcttggctctccttc
acagcacactctacttccaaacccagcatgtacttagaggtgaatactatagaagaagat
gacgatgtcagaactgagcgccagcgagtggaaggaggtttggcggcgaaagacacagtt
gtagtgtacaagctgaacaaaatgtatcctgggcaaggcgtagacgaggcgaaggtggcc
gtcagaaatctctcgcttggcattccaccgggacaatgctttggcttcctaggtgtaaat
ggagcaggtaaaaccaccactctctcaatcttgagtggcgacacaaaaccaacaagtggt
gatgtgttcatcaccggcaactccgtgttgagtaaactgcctgcatctcagaagcaaata
ggctattgtccccagtttaatccattgctggaccttatgacagccagggaacatctgcac
atgtatgccagcttgaaaggagttccctctcagagtgtgaggaaggttgttactgatttg
gtccaagctgttggccttgagaagtacgtggaccagctggcgggttcttacagtggcggc
aacaagcgcaagcttgctctttgcatcgcaatgattggagaccctgcggtactgtttctg
gatgagcccagcagtggcatggacccagtcacgcgacgagccatgtggaacctcatctta
aacgccgtggtagagaagaacatgagcgctgttctcaccacccacagcatggaggagtgc
gaggcgttgtgtgggcgcgtaggcgttatggtggcgggcagcttggtctgtctagggtcc
gtccaacacatcaagtctcagtttggtcaaggctacaccgtggagttacagtgctcacgc
gcagcttccctcactgatctccaccacttcatgaagtcggagtttccaggttccgttctg
gaggaggagcgtatgctgagagtcaagtattcactgcctcgaaacagccactctctttcg
catgtcttctcatccttggaaaaagctaagtatgatcttgaccttgatgactacagtgtg
agccaaagcacactagagcagattttcctaagtatggccagtgacagaaatgtcgaccga
gctcaaaggcccatgaaatcagatactcatgtatgtgaggtgtag
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