Physcomitrium patens (spreading earthmoss): 112282777
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Entry
112282777 CDS
T01041
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112282777
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppp01007
]
112282777
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112282777
Enzymes [BR:
ppp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
112282777
Amino acid related enzymes [BR:
ppp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112282777
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112282777
Prokaryotic type
112282777
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlxA
NUDE_C
DUF3490
ArnB_C
FlgN
Motif
Other DBs
NCBI-GeneID:
112282777
NCBI-ProteinID:
XP_024376614
UniProt:
A0A2K1KLD2
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Position
5:complement(20287624..20292719)
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AA seq
558 aa
AA seq
DB search
MASTAGGTMQALRGVSSAFYRFPSSRVVKAIASLDVATIPSISGTFGTATSWKKVENANW
RRQGLRCMASAASTAANNLVVSENYVAVSSPSTGSTETDNSSKQTWKASIDFKFIRDNKE
AIAKNIQNRKCGGDVEQVVQLYEQTVSLNQEVDKLRAERNAVANAMKTKLDASRREELIE
KGKQLKDQVSELEIELSLLQEKLQLEGQRIPNMTHPDVPVGSEDVATLRKEVGSQRKFTF
PVKDHVEVGLALDLFDFEAAAEVSGTKFYYLKNEAFLLEMALINWTMSKLLPKGFIPMST
PDLVRSTVVEKCGFQPRGQNTQVYSVEGTDLCLAGTAEIPVGGMYMDSMLPESALPLKIV
AYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVICRPEESDSLHEELISIEEELYASLGL
HFKTLDMSTEDLGAPAHRKYDVEAWMPGLGRYGEISSASNCTDYQSRRLNIRYRPAVVVA
TTAPSVPLQPPAKAKKVKNTLPPPRFAHTLNATACAVPRMMIAILENNQQEDGSVIIPEA
LRPFMGGIDVIRPKSSQP
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacagcaggcggcaccatgcaagcgttgagaggggtatcgtcagcattttac
cggtttccctcgtctagagtggtgaaagccattgcttccctggatgtggcgactataccc
tcgatctcgggcacttttggtaccgccacgagctggaagaaggtggagaatgcgaattgg
aggcgtcaaggtttgcgttgtatggcttctgctgcgtccacggctgccaacaatttggta
gtctccgaaaactatgtggctgtttcctcaccttcaacgggcagcactgaaactgataat
agttcgaaacaaacatggaaggccagcattgatttcaagttcattcgggataacaaggag
gctatagcgaagaacattcaaaaccgtaaatgtggtggagatgtagagcaggtggtgcag
ttgtatgaacagactgtcagtctcaaccaggaagttgacaaattgcgggctgagagaaat
gctgtagccaatgctatgaaaaccaagttagatgcgtcccgccgggaggaactgattgag
aaaggcaagcagcttaaggatcaagtttcggagcttgagatagaactatcactgctccaa
gagaagctccaattggaaggacagcgcattccgaatatgacacaccccgacgtaccggtt
ggttcagaggatgttgcaaccctacgaaaggaggttggaagccagaggaagtttacattc
cctgtcaaagatcatgttgaagtgggacttgctcttgacctatttgactttgaagcggca
gctgaggtgagtggtaccaagttctattatctgaagaacgaagcattcctgctggagatg
gccttaatcaactggactatgtctaaactgctaccgaagggctttataccgatgagcact
ccagacttggttcgctccactgtagttgaaaagtgtggcttccaacctcgaggtcaaaat
acgcaggtgtattctgtagaaggaacggacttatgcttggcaggaactgccgagattcca
gtgggcggcatgtatatggatagtatgctccctgaatctgcattacccttgaagatcgta
gcttactctcactgcttccgcacggaagctggggctgctggtgccgcaaccaggggtttg
tatcgggttcatcagttcagcaaagtggagatgtttgtaatttgtcgacctgaggagagt
gattcgcttcacgaggagctcatttccattgaggaggaactctatgcttctcttggtttg
cacttcaagacattagacatgtcaacagaagaccttggtgctcctgctcatcgtaaatat
gacgtggaggcttggatgccaggacttggtcgatatggagagatctcgagtgcctcgaat
tgcacagactaccaaagtcgaaggcttaatattcgatatcgacctgctgttgttgtagca
acaacagccccttcagtacctctacaacctcccgcgaaggccaagaaggtcaaaaacact
ctaccacctccacggtttgcgcacactttaaatgcaacggcatgtgctgtacctagaatg
atgatcgccattctcgaaaataaccagcaagaggatggttctgtcattatccccgaggcc
ttgagacctttcatgggtggcattgatgtgatccgccctaagtctagccaaccctga
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