Physcomitrium patens (spreading earthmoss): 112282947
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Entry
112282947 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112282947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112282947
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112282947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
Zn_ribbon_RanBP
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
GBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
112282947
NCBI-ProteinID:
XP_024376938
UniProt:
A0A2K1KLF2
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Position
5:20520838..20526593
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AA seq
740 aa
AA seq
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MPRKWRQSDFDDDGYDDYDEEDYYEEEEYLEDKEPTSTSSVVPGQSQSFTSTTQPTATEV
NEPETEEGLWACPVCTFDNSLDSLTCDICDTPREDLSEKVSDPSTSSKEKAYVVTEVQRV
SPLAKALFNPLPGTKSDQATASLRSNMPVLYQKSWGKVADSSSFSSKIVPFKFDTPSPDE
KNLAARGLKKSPIRVAQSPDDILNGARSSMAKAGTSKSISSAVSKLNVPGLSQSSGASTS
ESHVGNGSSSAPEGELADALKQMNVGGDYMESKSRENADASTSTYGLSLESYEPEPWMLK
DANKDSRQLLHLIVVGHVDAGKSTLMGRILHLLGRVSQKEMHKNEKESKQQGKGSFAYAF
VLDEGAEERARGVTMTVAVAHFETPKLRVVLLDAPGHRDFVPNMISGASQADAAILVVDA
SIGAFEAGLEGEGQGRGQTREHAQLVRSLGVEQLIVAVNKLDAVDFSKERFDFIRGTLQP
FLKQCGFKDGSLQWVPVSASEGQNLTMASTESALKAWYNGPCLIELVDSLKPPPRLVARP
LRLTIAEVMKTRTLGPSAFGGKLESGAIHSGTKVRVMPSGEIATVKSIELQGQQLKTARA
GEGVDVGLNGIDPGMLAPGGVVCHPDYPVPVATRFEVQLLTLDIRTPILKGSQVILHVHH
ARQPARVDQLVSLLDPKKGTVLRQRPRHLTANQSAIVVIVPDEGVCIEKYSDFRALGRIA
LREGGKTIAVGIVTDILERK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaatggaggcagtctgatttcgacgacgacggttatgatgattacgacgag
gaggactattacgaagaggaggagtacttggaggacaaggagccgacttctacctcttca
gtcgtgcctggacaatctcagagctttacatctacaacgcagcctaccgcaactgaagtc
aatgagcctgagacggaggaaggtttatgggcttgtccggtgtgcacttttgataattca
ttagatagtttgacttgcgacatttgtgatactccacgcgaagatctcagcgaaaaagtc
agcgacccgtcaacatcctcgaaagagaaagcgtatgttgttactgaggtccagcgagtt
tcacctcttgcaaaagccctttttaacccgctgccaggaaccaaatctgaccaagcaacg
gcttctcttagaagtaatatgccggttttatatcagaaatcttggggcaaagttgctgac
tcttcatcgtttagttccaaaatagtgccatttaaatttgatactccttctccagacgaa
aaaaatttagcggctcgtgggcttaaaaaatcacctatcagagttgcccaaagtccagat
gacatattgaatggcgccagaagtagcatggccaaagctgggacctcgaaatcgatcagt
tcagcagtctccaaactgaatgtaccaggattatctcaaagttctggagctagtacaagt
gaaagtcatgtgggaaacggtagctcttctgctccagaaggtgaactggctgatgctttg
aaacaaatgaacgttggtggcgattacatggaatcgaaaagcagagagaatgctgatgct
tcaaccagcacttatggattgtcacttgaatcttatgaacctgaaccgtggatgttaaag
gatgccaacaaagactcgagacagcttcttcatctcattgtggttggacatgtcgacgct
ggaaagtctactctcatgggccgtattctacatcttcttggtcgagtttctcagaaagaa
atgcataagaatgaaaaggagtcaaagcaacagggtaaaggttcatttgcatatgcattt
gtcctagatgagggtgcagaagaacgtgcacgtggggtaacaatgacagtggctgttgct
cattttgaaacgcctaaactacgcgtagtgcttctagatgctccaggtcacagggatttt
gttcccaacatgatatctggggcatctcaagcagatgctgcgattcttgtggtggatgcc
tcgatcggggcttttgaagcaggtttggagggagagggtcaaggcagaggacaaacaaga
gaacatgctcaattagtgagaagtttgggtgtggaacagctgattgtagctgtaaacaaa
ttggatgctgttgatttctctaaggaaaggtttgattttatcaggggtacacttcaacct
ttcctgaagcaatgtgggtttaaggacggatcgttgcagtgggttcctgtaagtgcgagt
gagggtcagaatttaacaatggcatcaacagaatcagcattgaaagcatggtacaacggt
ccttgcttaatagagctggtagactcattaaagcctcctccaaggcttgtggccagacct
ttgcgccttactattgccgaagtaatgaaaactcgtactcttggacctagtgcatttggt
ggcaagcttgagagtggcgcaattcacagtggcaccaaggttcgagtgatgccaagcgga
gaaattgctactgtgaagagcatagagttgcagggacagcaattgaaaactgcaagggct
ggagaaggagtagatgtggggcttaatggcattgatcctggtatgttagctccaggaggt
gtggtttgtcatcctgactacccggtacctgtagctacccggtttgaggtccaacttctt
actttggacatcaggactccaattcttaagggctcgcaggtgattttgcatgtccatcat
gcacgacagcccgcaagggtggatcagcttgtatccttgttggaccctaagaaagggaca
gtcttgaggcagcgtcctcggcatttgactgccaatcagagtgctattgttgtgatagta
cctgacgagggagtgtgcattgaaaagtacagcgattttcgagctctagggcggatagcc
ttgagagagggaggtaaaaccatagctgttggtatagtcacggacatactcgaaaggaaa
taa
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