Physcomitrium patens (spreading earthmoss): 112282975
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Entry
112282975 CDS
T01041
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112282975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112282975
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
112282975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
112282975
NCBI-ProteinID:
XP_024377001
UniProt:
A9TM73
LinkDB
All DBs
Position
5:7920690..7922207
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AA seq
319 aa
AA seq
DB search
MRPPLTRGGGGFRGGRGDGGFGGGRGGGRGFGGGRGGRGGDRGGRGGGRGGGRGAPRGGR
GGRGGGGGRGGGMKGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDN
EDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGI
VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIV
AINAHNFLKNGGHFVISIKANCIDSTVPAEAVFAAEVKKLQKEQFKPAEQVTLEPFERDH
ACVVGTYRAPKKAKPAAGS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgccattgacgagaggaggaggaggattccgaggaggaagaggcgatggcggt
ttcggaggaggtcgtgggggtggtcgcggcttcggaggaggccgtggaggccgaggcggt
gaccgaggagggcgcggaggaggacgaggaggcggtcgtggagctcccagaggaggccgt
ggtggcagaggaggtggtggaggacgaggcggtggtatgaagggaggagccaaggtcatc
attgagcctcacagacacgagggtgttttcgttgctaaggctaaggaagacgcgctcgtg
acgaagaatcttgtgcccggggagagcgtgtatggagagaagagaatatctgtagacaat
gaggacggaaccaagacggagtaccgtgtgtggaaccccttcaggtcgaagcttgctgct
gcgatcctgggtggtgtggacaatatttggattaagccaggcgctcatgtgctgtacctt
ggtgctgcatctggaaccaccgtgtctcatgtttctgatgttgtcggaccctccggtatt
gtgtacgctgtcgaattctctcaccgtagtggccgtgaccttgtgaacatggccaagaag
cgtaccaatgttatccctatcatcgaagatgcaaggcatcccatgaagtaccgaatgttg
gtcggtatggtggatgtcatctttgctgatgtcgcgcagcctgaccaggctcgtattgta
gccatcaatgcccataactttctgaaaaatggtgggcatttcgtaatttcaatcaaggct
aactgcattgactccacagtacctgccgaggctgtgttcgccgcagaggttaaaaagttg
cagaaggaacagttcaagcccgctgagcaagttacactcgagccattcgagcgagaccat
gcttgtgtggttggcacctatcgtgcaccaaagaaagcgaagccagctgcgggttcatag
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