Physcomitrium patens (spreading earthmoss): 112282980
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Entry
112282980 CDS
T01041
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112282980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112282980
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112282980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
112282980
NCBI-ProteinID:
XP_024377007
UniProt:
A0A7I4FQ39
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Position
5:complement(9025090..9031884)
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AA seq
993 aa
AA seq
DB search
MGKGSIGSGYDCEEELREDEEEESQEEAGEEEEEEEREEEEDEEEEEEEGVNVREDDEAE
SQKAQNVAALIRGDVQVNRQALLPKVLTVSDAAVVIRRPFKSPCPKASSGSNIELLRRLS
ARKRFIPWGCSRSPLTSITNTPIPLAPAKEEEPLKIELPPGVEPLVLWQPDENDGGSEEG
PAEKLQPIIVDPHLTKFLRQHQREGVQFMFECVAGLRGMAISKDEKATSGGCILADDMGL
GKTLQSITLMWTLLKQGFDGRPMATRVVIITPTSLVSNWEQEITKWLSHSTVNVLAMCES
TRSDVLQGISTFLSPQNFYQVLIISYETFRMHAARFEKEGSCDLLICDEAHRLKNDKTLT
NQALASLPCFRRVLLSGTPMQNDLEEFYAMVNFTNPGVLGNASTFRKYYENPILTGREPD
ATDEARAISIERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTELQTSLYRHFI
RSKNVRQALEDQTKRAKVLASITALKKLCNHPKLIYDTIRAGGSEAAGFGDCLKLFPPHL
VASRSSSWPDWIELSGKMAVLARLLSELRCKTDDRIVLVSNYTQTLDLFAQICRERNYPF
VRLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPATD
KQAAARVWRDGQKKRVYVYRFLASGSIEEKVFQRQMSKEGLQKVVDKEQSTDAKAQVNML
STDDLRDLFTLREDVRSDTHDSISCERCDAEGGPGEMTSTSDISAVMVEDIGEFAKVAGC
AGKLRSWERQVGTPAEEDLLSWAHHSDSSTIPDAMLEAASRNQISFTFTCQIDGKLTPID
SFPRSSALYTTPSLKARACAIPVTRTLRDPKISQTPNSFTSGPSTNIREELGAVTTAQSI
LRGLPPSARKAEAPGIVTPPARSILRGLPPSAKKSPATVLPRTPVLPPKKRPKITIVHKA
SRHIAASQHSSDESSASEFVADDDEDDNDEDFA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggatctattggtagtggttatgactgcgaggaggaattgagagaggacgaa
gaggaggagagtcaagaggaagcgggagaggaagaagaggaggaagagagagaggaagaa
gaggatgaagaggaggaagaggaagaaggggtgaatgtgagggaagatgatgaagctgaa
tctcaaaaagcacaaaatgtggccgctttgataaggggtgatgtgcaagtgaatagacag
gcattgctcccgaaagtccttacagtatcagatgcagcagtagttatcaggagaccattc
aagtctccatgccctaaagcttcctctggttccaacatcgagcttcttcgtcgtctttca
gctcggaagcgttttatcccatggggttgttcaagatcaccactcacttctatcacaaat
acaccaataccacttgcccctgcgaaagaggaggagcctctcaagatagagctccctcca
ggggttgagcctctggttttgtggcagccagatgagaatgatgggggttctgaagaagga
ccagctgaaaaactacaacctatcattgtggatcctcaccttacaaaattcttgagacaa
catcaaagggaaggtgttcagtttatgttcgagtgcgtagctggtcttcgtggcatggcg
atatcaaaagacgagaaggctacttctggtggttgcattcttgcagatgacatgggattg
ggcaaaactctgcaatcgatcactcttatgtggacgctgttgaaacaaggctttgatggg
aggccaatggcaacgagagttgtaattatcactccaactagtcttgtgagcaattgggaa
caggaaattaccaaatggctgagtcacagtactgtgaatgtgctggctatgtgtgagtca
acccgatcagatgtccttcagggaatttctacttttctctcgccacagaacttttatcag
gttcttatcatttcatacgaaactttccgcatgcatgcagcaagatttgagaaagaaggt
agctgcgaccttctcatttgcgacgaagctcacaggctcaaaaacgacaagacacttact
aaccaggctctcgcttctcttccatgctttaggcgtgtgctattatctggtactcctatg
cagaatgacctagaggagttttatgctatggtcaattttacaaatcctggagttctcggc
aatgcaagcacttttcgtaaatactatgagaacccaattctgaccgggcgggagcctgat
gctactgatgaagccagggcaataagtattgaacgatcagcagagcttagtgagaaagtg
aatcagttcatattacggcggacaaatgctttactatcaaatcacttgccacctaagata
gtagaggttgtttgttgtaaattgacggagcttcaaacgagtctatatcgacacttcata
cggtcaaagaatgttcgtcaagccttggaagaccagacaaagcgagctaaagtattagca
tcaattacagcattgaagaagttatgcaatcatccgaagctcatctatgacaccattcgt
gctggtggatctgaagctgctggatttggtgactgcctgaaattgtttccaccacacttg
gtcgctagccggagtagctcgtggcctgactggattgaattgtccgggaagatggcagta
ttagctcgattgctttcggagctgcgctgcaagactgatgaccgcatcgttctcgtctcg
aactacacccagactctcgatttatttgctcagatttgccgtgagaggaactatccattt
gtgagactggacgggactacctcaattggtaaacggcaaaagttggtttctaggtttaat
gacccgaatcagaacgagttcgctttccttctaagtagcaaagcaggaggctgcggtttg
aatttgattggaggcaatcgattggtgctatttgatcctgattggaatcctgcaactgat
aaacaggcagcagctcgagtttggagggatgggcaaaagaaaagagtatatgtttatcgg
tttcttgccagtggaagcattgaagaaaaggtattccaacgccagatgtctaaagagggc
cttcagaaggtagttgataaagaacaatcaactgacgctaaagcgcaggttaacatgttg
tctaccgatgatctcagagacttgttcacacttcgtgaagacgttaggtctgatacgcac
gattcgattagctgcgaacggtgtgacgcggaaggtggccctggggagatgacaagcact
tccgacatctctgctgtcatggttgaggacattggagagtttgctaaggtcgctggatgt
gctggcaagctgagatcgtgggagagacaggttggaacacctgctgaagaagacctcttg
agctgggctcatcactctgattcttccaccatccctgatgccatgctggaggctgcttct
agaaatcagatttcatttacctttacctgccagattgatggcaaactcacccccatcgac
agttttccacgctcatcggcactctatactactccctccttgaaggctagagcatgtgca
atacctgttactagaacgttgcgtgatcccaagatctcacaaaccccgaattcatttacc
agtgggcccagcacgaatattagggaagagcttggggcagttactacagcccagtcaatt
ctacgtgggctgcctccttctgcaagaaaagctgaagcacctgggatcgttactccacca
gcgaggtcgattctgcgtggacttcccccttctgcaaaaaaatcgcctgcgaccgtgttg
ccgcgaacgccagtcttgcctcccaagaagcgcccaaagatcactattgtccacaaagct
agcagacacattgctgcttcacaacattcgtcagacgagagcagtgcctctgaatttgta
gctgacgatgacgaagatgacaacgacgaagactttgcctga
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