Physcomitrium patens (spreading earthmoss): 112282994
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Entry
112282994 CDS
T01041
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112282994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112282994
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
112282994
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
112282994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
Sgf11
Motif
Other DBs
NCBI-GeneID:
112282994
NCBI-ProteinID:
XP_024377033
UniProt:
A0A2K1KI61
LinkDB
All DBs
Position
5:1638779..1646255
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AA seq
1147 aa
AA seq
DB search
MDGRRKTCGALKGHESLLRLVGKRRKLHPSVFSSPIVEAVHLDVKVHNELPTAIETCNAE
DNARSIQTVEENGKEILFPEWVTCPVCSKSIEGNDAVINNHLDTCLAKRNRRKSTQLTLF
STMKRISKPSTSAVRRKDDATPGKRTSVVSNVPEKHTLSTSHLAESKVMNSSCDDDSQEE
LPIAVNPLKGHTDTDMGFTGMPPLVGDDSGVSSPSKEVIFRNDDQSDKFLEMKILNEGLA
VPPSNEEAEKLVPMVQVLRSQILKFENTTSQEPATVVGSQGEIGVKVESSELTETDAAKN
EEVCICLCHYASISSCNPNHKQSMNSTLMENSTEVKDGAPAPDLNDTLGDAARRDSLAVV
GSIDTCIVGRKFSVEVACKEGMELTFVRDGDNPKDSNAIKVLTLDELDLGYLPRQVALHL
SVLLDKELGYLKGFVLTPPEDDFDAVPIQISFVKKFFEAIHEELINKCWQGVVAASLVAP
RRIKYEANFLRLLQTVLERDSHLFNPEEFAFLSSFSAMSGDAQRLFIHLYQRKGPWFRFN
NLSYSDVADMESSVQELTAAGYMNTSETLADGSDTEVREVTEVLSVMELRQLVCTAQLKN
KKEVANARKEELVSWVSSGILAKDQVSARGSCSGIVVKNMMLNLVGPCIRVSDDAVFLLW
RLQRLFFLNGDQELSSFLLVDMGMVKYPEYRCNRKMPIFATREGLLEYEKALEVAQAMDM
ALEVNDMPIVLTFLEKSRTFLRQDRSSNESLRNDCPSFLYRFTAARVYSTICTLGVSILE
REHRYGEAVEYLKELLSSCTRSGRRGYWTVRLSVDLEHLGRKEESLQVAEMGVNDPSIRG
GDLVALQRRVVRLSKPPRRWKKPPYADALELKVEEVQIRGRPLNCTIGMKSRFYGFDGQQ
CGVEELALQHYASEEGGGWQGMHSEGGIWMTLFGLLMWDIIFADVPDVFQTPFQTAPLDL
NTRSFFTSRQSIIEKRLEEIRQGCAVVLLAECWSKYHGTCCRGINWHRYSLENLQIIAAC
VGGSGLSALIRLLCQDHAGYSAGMPDLLLWRTYKEPSQLRRAGSVMDCRSCDCSQETDSL
ELENIVNSEETKRPEKTKGHVLRGEAKLVEVKGPRDRLSEQQRAWIVVLLNAGLSVQVCK
VFETLEN
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaggaggaagacctgcggggcgcttaagggacatgagagcttgctacgatta
gtggggaagcgtcgcaagctgcacccttctgttttcagctctcccatcgtcgaagccgtg
cacctcgatgtcaaagtccacaatgaattgcccaccgcgattgagacttgtaatgcggag
gacaatgcaaggtccatacagactgtggaagagaatggcaaggagattctctttcctgag
tgggtgacttgccctgtttgctctaagagcatagaaggaaacgatgctgtcatcaacaat
catctagacacatgtcttgcaaagcgtaacaggcgcaagagcacgcagctcacactattc
agtacaatgaaacggatttcgaagccctcgacttcagctgttaggagaaaagatgacgca
acaccagggaaaaggacttctgtagtttctaatgtgcctgaaaagcatactctatcaaca
tctcacctagcggagtctaaagttatgaactcatcttgtgacgatgattctcaagaggaa
ttacccattgccgtcaatcctcttaaaggccacactgatacagatatgggtttcactgga
atgccccctcttgttggcgatgatagtggagttagttcaccttccaaggaagtgatattt
cgtaatgatgatcagtctgataaatttctagagatgaaaatcttgaacgagggtttagcc
gtcccgccaagtaacgaagaggctgaaaagctggtccccatggttcaagtgttgaggtct
cagattttgaaatttgaaaacacgacatctcaagaaccggctacagtggttggctctcaa
ggtgaaataggtgtgaaagtggagtcttctgaattgactgagactgatgctgcaaaaaat
gaggaggtttgtatatgtttgtgccactacgcttctattagctcatgcaatccgaatcat
aaacagtccatgaactctactttgatggagaactccacagaagtgaaggatggtgcacca
gctccagatctgaatgatactcttggagatgcggctcgtagagattcgttagcagtcgta
ggcagtattgacacttgtatagtcggcaggaaattcagcgtggaagttgcctgtaaagag
ggaatggaacttactttcgtaagagatggagacaatcctaaggattccaatgctatcaag
gtccttacattagacgagttggatctgggttatcttccaaggcaagttgcacttcatctt
tctgttctcctcgacaaagaattagggtatctgaagggcttcgtattgacacctccggaa
gacgattttgacgcagtaccaatacaaattagcttcgtgaagaaattttttgaggctata
catgaagagttaattaacaagtgctggcagggggttgtggccgcaagcttggtcgcccca
agacgtattaagtacgaagccaattttcttcgtctgctccaaactgtcttggagcgtgac
agccacttgttcaatcctgaagaatttgcttttttgagctccttctcagctatgtctggt
gatgcgcaaagactctttattcatttgtatcaacgtaaaggtccttggtttcgcttcaat
aatctgagttattcagatgttgctgatatggagtcatctgttcaggagcttactgctgct
ggatacatgaatacatctgaaacactagctgatggctctgacaccgaagtaagggaggtt
acagaggttctaagtgtcatggagctgagacaacttgtgtgtacagcacaattgaagaat
aagaaagaggttgcgaatgcaagaaaagaagaacttgttagctgggtttcctctggtatt
cttgctaaagatcaggtttcagctcgtgggagctgcagtggtattgttgtgaagaatatg
atgctgaatttggttggaccttgcattcgggtttctgatgatgcggtattcttgctctgg
agattgcagagacttttcttcttgaatggagatcaggagctttcttcttttctgttggtg
gacatgggaatggtgaaataccctgaatacagatgcaatcgaaagatgcccatttttgca
acccgtgagggattgcttgagtatgagaaggcactggaagttgcacaagctatggatatg
gctcttgaagtgaacgatatgcccatagtactgacttttttagagaaatctcggacattt
ttacgtcaggatcgaagcagcaacgagtcactgagaaatgattgcccttcttttctttac
cgcttcacggctgctcgtgtgtattcaacaatttgtactttgggtgtttcaatacttgaa
cgagagcacagatacggagaggcagtggaatatttgaaggaattgctctcttcgtgcaca
cgatcaggtaggcgagggtattggactgttcgactgtcagtcgacttggaacaccttggc
cgaaaggaagagagtcttcaagtggcggaaatgggtgttaacgacccttcaatcaggggt
ggagatcttgtagcgttgcagagacgggttgtccgtcttagcaagcctcctcgaaggtgg
aaaaaaccaccatatgctgatgctttggaactgaaggttgaggaggtccaaataaggggt
cgcccgttgaattgtactataggaatgaagagccggttttatggtttcgacggtcaacaa
tgtggagtggaggaactggctttacagcactatgcaagtgaagaaggaggtggttggcaa
ggaatgcattcagaaggtgggatctggatgacactctttgggctacttatgtgggatatt
atatttgccgacgtacccgatgtcttccagactccgtttcagacagccccactagatctg
aatacccgttccttttttacatcgagacaatccatcattgaaaagcgccttgaagaaatt
cggcaaggttgtgcagttgtgctgcttgcggaatgctggtccaagtaccatggcacctgc
tgtcggggtatcaactggcatagatattctcttgagaatcttcaaattattgctgcttgt
gttggaggatctggtttgtctgcactcattcgacttctctgtcaagatcatgctggatac
tcagcagggatgccggatcttctcctttggcgaacttataaggaaccaagtcaactgaga
agagccggttccgtcatggattgtcgaagttgtgattgtagtcaagagacagattctttg
gaattggaaaatattgtaaattcggaggaaacaaaaagacctgaaaaaacaaaggggcat
gtgttgcgaggagaagcaaaacttgtggaggtcaaaggacctcgagatcgactctcagaa
caacaacgtgcttggatagtcgtcctgctgaatgcaggcttgtcggtccaggtatgcaaa
gtctttgagactttagaaaactaa
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