Physcomitrium patens (spreading earthmoss): 112283089
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Entry
112283089 CDS
T01041
Name
(RefSeq) eukaryotic translation initiation factor 2A isoform X1
KO
K15026
translation initiation factor 2A
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112283089
03012 Translation factors [BR:
ppp03012
]
112283089
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112283089
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
eIF-2A
112283089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_Aladin
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
112283089
NCBI-ProteinID:
XP_024377156
UniProt:
A0A7I4E5I5
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Position
6:complement(9160744..9165566)
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AA seq
541 aa
AA seq
DB search
MATVPPLKFTVRDPNGLSLLTGPPFSGEPAATFEKIPCSASKFSNDGSKLAVTTPNALVI
YDTDSGKELIQIPAAGVASAVFSPLGTYLQTFQKPQGQQKNLVLWDSKTGSIVLQQFQKA
ISKTSWPVIQFSDDESVACRLVTNEVHIFDGHDFSKGIIDRLRLPGIDGVQLAHSPASHI
AAYVPEIKGAPANVRIFELANVSQAQSVARRSFFKSNTAQLSWNKGSTGLLVLAQSDVDK
TNQNYYGESRLHYLTSDGRHEGAVPLSKEGPIYDVQWSPNGKEFLVVYGFMPAKVTLFNV
QCKPLFEFGQGPYNYLRWNPQGSFICLAGFGNLPGDVAFWDRESLKCFHTLKAPVTVTAE
WSPDGRYFMTATTAPRLQVDNGFKVFKYDGTPHYEKKYDKLYQAEWRPASSDVYPDRPPS
PGARKLESKVEAPKTVQPRTGTKPGAYRPPHAGQAASVKAQLLGLDETSKASTGSQQERL
EESEASPKKEGRCRLMKPIRCSLCSRIWWLMHAQLENFGLGGFAWPLTSVQKLIDAVVQH
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgtaccgcctctcaaattcactgttcgagaccccaatggactgtcgctgctc
actggaccgcctttcagtggcgagcctgcagccacttttgaaaagataccatgcagtgca
tcgaagtttagtaacgatggaagcaagctagcagtgactacaccaaatgctctagttata
tatgacaccgactctggcaaagaacttattcaaataccagcagccggtgtggcgtctgct
gttttctcaccactgggcacgtatttgcagactttccaaaagcctcaaggccagcaaaaa
aatttggttttgtgggattcgaaaactggttctattgttctgcagcaattccagaaggcc
atttccaaaacctcatggcctgttatccaattcagcgatgatgaaagtgttgcatgtcgg
ttagtgacaaacgaagtacacatatttgatgggcatgatttctcgaaaggcatcattgat
cggcttcggttgccaggaattgatggtgttcagcttgcacattcacctgcctcacacatt
gccgcgtacgtgcctgagattaagggtgctccagctaatgtacgtatattcgaacttgcg
aatgttagtcaagcacaatcggttgctagacgaagcttttttaagtcaaatacagctcaa
ttatcatggaacaaaggttccacaggcctactggtgttggctcagtcagatgtcgacaag
actaaccagaactactatggagagtcgcgtttgcactatttgactagcgatggccgccat
gaaggggctgtacctttgagtaaggagggtccaatatatgacgtgcagtggtctccaaac
ggcaaagaatttctggtcgtttatggctttatgcctgcaaaggtgaccctattcaatgtt
caatgcaagccactctttgagttcggacaaggcccttacaactatttgcggtggaatcct
caaggcagtttcatctgcttggcgggttttgggaatcttccaggagacgtggccttttgg
gatcgagaaagtctgaaatgctttcacaccttaaaagctcctgtgaccgttacagctgaa
tggtctcctgatggccgctatttcatgacagccactactgcgcctcgtcttcaagtagac
aatgggttcaaggtgtttaaatatgatggtacccctcactatgagaaaaaatatgacaaa
ctttatcaggctgaatggcgccctgcttcaagcgacgtttacccagaccgacccccatct
ccaggagcccgaaagcttgaaagcaaggttgaggcaccaaaaactgtccaacccaggaca
ggcactaaaccaggagcatatcgtccaccacatgctggccaggcagcttctgttaaagct
cagttgcttggacttgacgaaacatctaaagctagcacagggtctcagcaagagcgcctt
gaagaatcagaagcgtcgccaaaaaaagaaggaaggtgcagactcatgaagccgattagg
tgctcattgtgtagcagaatttggtggctcatgcatgcccaacttgagaattttggttta
ggtggctttgcgtggcctctgacgtctgtacaaaagttgattgatgctgttgtgcagcac
agctga
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