Physcomitrium patens (spreading earthmoss): 112283120
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Entry
112283120 CDS
T01041
Name
(RefSeq) alpha-L-arabinofuranosidase 1 isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00520
Amino sugar and nucleotide sugar metabolism
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112283120
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
112283120
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
112283120
NCBI-ProteinID:
XP_024377236
UniProt:
A0A7I4E9I5
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Position
6:6459264..6464669
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AA seq
687 aa
AA seq
DB search
MSAGDRHALHTVTAMSRLLCILVVAFTTHLVVPALAQSTVTLKVNATNPGRQIPSTLFGL
FFEEINHAGDGGLWAELVQNRGFEAGGLNVPSIIEPWYKIGTAAQITIGTECSSPHARNP
VALKIEVLCDNNDASLQCPKGGVGVANPGFWGMNILSGSKYRVEYWLKTTSSFNLSVAFT
SANGTVLAQEHVSLNAGEWRKYSVVLMATSTDHNARLSLTSGTRSVFWVDQVSGMPTDTF
KGHGFRKELATMISDLKPGFLRFPGGCYVEGARLVNAFRWRDSVGPYENRPGHYGDVWYY
WSDDGFGYFEGLQLAEDLGAAPIWVFNNGISHEQSVSTDVIGPWVQDVLEGIEFARGPVS
SKYGAMRASMGHPDPFPLHHVAIGNEDCYKPYYKENYMEFYKAIKLLYPDIQVISNCDGS
GAALDHPADLYDYHIYTNANNLFSMRHQFDKTSRSGPKAFVSEYAVTGSDSGKGSLLASL
AEGAFLIGLELNSDVVHMASYAPLFVNDNDRRWNPDAIVFNSWQQYGTPSYWVQQFFKKS
NGAYLISSTMEADSASALANLATSAVRTYNASTGMEYMIVKAVNFGSSALNLSIAVSGIS
ANNVVAADSHITVMTSGAVMDENSFTNPKKVVPQVSQAENAAPNMQILLPAHSITALELG
LLPTKSSTATLEVTQVTSKDSKAPFLV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaggagatcggcatgcgcttcacacagttacagccatgtctcgcttgctatgc
atcttggtggtggcgtttacgactcacctagtggtgcctgcacttgctcaatccaccgtg
acgctcaaagtgaatgcaacaaatcctggcagacagattccatctactctttttggacta
ttctttgaagagatcaatcatgcgggagatggtggcctttgggcagagcttgttcagaat
cgaggtttcgaggcgggaggtttgaatgtaccatcaatcatcgaaccctggtacaagatt
ggcaccgcagcacaaatcacgattggaaccgaatgctcgtcaccacacgcccgaaatcca
gtggcactcaaaattgaagtcctctgtgacaacaacgacgctagcctgcagtgtcccaag
ggaggcgttggggttgctaaccctggattctggggcatgaatatattgtctggctccaaa
taccgagttgagtactggttgaagacgacaagttctttcaatctttctgtggccttcaca
tctgcaaacggaaccgttttggcacaagagcatgtcagtctgaatgctggagaatggagg
aaatactcggttgttttaatggctacgtctacggaccacaacgctcggttgtctttaacg
agtggcacaagaagcgttttctgggtggaccaagtttctggcatgcccacagatactttc
aagggacatggatttcggaaggagcttgccacaatgatctccgacttgaaacccgggttc
cttcgtttccctggtggttgctatgttgagggtgcacggttggtaaacgcattccgttgg
cgggattcggtgggtccttatgaaaatcgtccgggacattacggagacgtgtggtactac
tggtctgatgatggctttggctacttcgagggcctccagctggccgaggatttgggagca
gcaccgatatgggtctttaacaacggtatcagccacgaacaatcggtctcaactgatgtt
attggaccatgggttcaggatgtactggaaggaattgaatttgcaagagggcctgtttcc
tcaaaatatggtgcaatgcgagcctcaatgggacaccccgatcctttccctctccatcat
gtggcaattggtaatgaagactgttataagccgtattacaaagaaaactacatggaattc
tacaaagctatcaagcttctgtacccagatatacaggtgatttctaattgcgatggctcg
ggtgcggcgctcgaccatccagccgatttatatgactaccatatctacacaaatgccaac
aaccttttttcaatgcgtcaccagtttgataagacttctaggagcggacctaaggcattt
gtaagcgagtatgcagtaacgggatctgactccggaaaaggcagtctgctggcttcgtta
gccgaaggcgcatttcttattggcttagagctcaacagtgatgtggtgcatatggcaagc
tacgcacccctctttgttaatgacaacgacagaagatggaaccccgatgcaattgtcttc
aactcctggcaacagtatgggacacccagctactgggttcaacaatttttcaagaaatcc
aacggcgcctacctcatatcctccaccatggaggctgactcagcctcggcccttgcaaat
cttgcaacatcggctgtccgcacatacaatgcctctactggaatggagtatatgattgtc
aaggccgtgaacttcggaagcagtgctttgaacctgagcattgccgtgtctgggatatca
gccaataacgtcgtggctgcggattcgcatatcacggtcatgacatcaggagcagtgatg
gacgagaactcgttcacaaatccaaaaaaggtggtgccccaagtgagccaagccgagaac
gcagcaccgaacatgcaaatcctacttcctgcacactcaatcacagcccttgaattgggg
ttgttacctacaaagagctccacagctacacttgaggttacacaagtgacctccaaagat
agcaaagcgccgtttctggtttag
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