Physcomitrium patens (spreading earthmoss): 112283147
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Entry
112283147 CDS
T01041
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112283147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112283147
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112283147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
FliG_N
TPR_12
DUF4618
Motif
Other DBs
NCBI-GeneID:
112283147
NCBI-ProteinID:
XP_024377275
UniProt:
A0A2K1KGC8
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All DBs
Position
6:complement(12603218..12611237)
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AA seq
861 aa
AA seq
DB search
MAGRDTDMRSWADLLHNSSQLLHSYTPSAPLPPIQRSLEQLETLSRQLKARTSRYEAPNE
AIAATRLLAREGISADQLTRDLKSFELKTSFEDVFPVEATSVEEYLQQVHEMAMVSAIQE
AQRDNLRSFDSYMLKVLEDDWMKEKREFLNNLSRLPQAPSNVGQSAITNAIQPYQGSTAI
TPRRLQDTPRGQENVSAQQNVVSKKAAAYANVVMRLNEARERSLPFKVATTMKSAYESTA
WETTTSKSVTLTKIWHLMQSILSEDIDMPSNVSKKACMVAGSRRHLEAGHEKYILDTIHN
HPAQAALGGSTGNLQRVRAFLRVRLQDQGSVLDFDASDLQRQPPLDTTWHQIYYCLRSGY
YDEALLVAQQSRLSRTFAPQLSEWISKGGSVSPNTAAAILEECERMARSGDRAGRGGYDK
KKMLLYTIVCGNRQQADHLLRDMPSLFSTIEDFLWFRLALIGTSSESSSQGRPSADGSTS
YTLEELQGYLTKFQPSHYTKNGKDPLVYPYVLLLSLQFHAAVVYMMKEDNHVDSIHIAIT
AADYGCFSEGNNGVKKLGSMDAASEVASIIRHYALAYVRQGNMPLALEYYAQAAATVGGG
AVAWSGHGNSDQQRQHHLLLKQLMSELLLRDGGIPLLLGGRGSGAEGSLRRFIPDPQSQR
NLLMEAARQCQESGFHDKAVELLKRIGEFATALEIVNQCLSDTIAAMASGRGDGDTKSSG
LIHAGNEILEGFKVVGGSSLPNSEQVAAQQTAFRQLESLLTFYRFTRSGRYSDALMELAK
LNFLPLGTRTPESSAEALRYTSLHVQACVPDLLREALTCLDQVNDADGTVRRLKSKIANF
IANSLPRNLPQELYDRVAQIL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgggatacggacatgcggagctgggcggacctgttgcataattcgtcgcag
cttctgcattcctacaccccttctgctccgctcccgcccatccagaggagcttggaacaa
ttagagacgttgtctcgacaattgaaagctcgcacttcccgttacgaggctccaaacgag
gcaatcgctgcaactagattgcttgctcgagaaggtatcagcgccgatcaactaacgcga
gatttgaaatcatttgaactcaagacttcctttgaggatgtatttcccgtggaggctaca
agtgtggaggagtacttgcagcaggtacatgaaatggccatggtgtcagcaattcaagaa
gctcagcgggacaatctccgcagctttgattcttacatgttgaaggtgctggaggatgac
tggatgaaagaaaaacgagagttcttaaacaacttaagccgattaccacaggctccatca
aatgtaggtcaatcagcaattacaaatgccatccagccttatcaaggctctactgcaatt
actccgagaaggctgcaggacactccgcgtggacaggaaaatgtgtcagcacaacaaaat
gttgtttcaaaaaaagctgcagcctatgcaaatgttgtaatgagactcaatgaagcaaga
gagcgtagtttgccttttaaggttgcaactacaatgaaatcagcatatgagagcacagca
tgggagactacaacatctaagtctgtgaccttgacaaagatatggcacctaatgcagtct
attttgagtgaagacattgatatgccatccaatgttagcaaaaaagcttgcatggtagct
ggctctagaagacacttggaagctggtcatgagaagtacatactagacactatccacaac
caccctgcccaggcagcattggggggctcaactgggaacttgcagcgcgttagggctttt
cttcgtgtacgcttgcaagatcagggatctgtattggactttgatgcctcagatctgcaa
agacagcctcctctggacactacatggcatcagatctactattgtttaagatcaggttac
tatgatgaagccttattggtagcccagcagtccaggctgagccgcacatttgctccacag
ttgtcagagtggatttccaagggaggttcggtttctccaaatacagcagctgctattttg
gaggagtgtgagagaatggctcgatctggggatagggcagggagaggcggatatgataag
aaaaaaatgttgttatacacgattgtttgtgggaacaggcagcaagccgatcatctgctt
cgggatatgccatccctatttagcaccatcgaggattttctgtggtttcgtttggccttg
attggaacgtcatctgaatcgtcttctcaaggacggccatcagctgatgggtcaacctca
tatacacttgaagaactccagggttatctcacgaagtttcaaccctctcattacacaaag
aatggcaaggatcctttggtgtatccttatgtgctccttctgagcctacagttccatgca
gcagttgtttatatgatgaaagaagacaatcacgttgacagtatacacattgcgattaca
gctgcagactatggttgtttttctgaaggaaacaatggggtgaagaagctaggatctatg
gatgctgcttccgaggtagccagtattatcagacactatgcgttggcttatgttaggcag
ggcaatatgcctttagcattagaatactacgcccaggcggcagcaacagttggcggagga
gcggtggcgtggagtggtcatggcaacagcgatcagcaacggcaacatcatctgctgctt
aaacagctcatgtcagaacttttgcttcgagatggtggcattccgctgctgcttggtggc
agaggatctggtgccgagggctctttgcgacgtttcatacctgacccgcagagccagcgc
aatttactgatggaggctgctcgacaatgccaggaatctggcttccatgataaggccgtt
gagctactgaagcgcattggagagtttgccacagccttggagattgttaaccagtgctta
tctgatacaattgctgctatggctagtggccgtggtgatggtgacaccaaatcttcagga
ctcattcatgctggcaatgaaatacttgaggggttcaaagtggttggaggttccagtctg
ccaaattcagaacaagttgcagcgcaacagactgcttttaggcagttggagtcattgctt
acattttacagatttactcgaagcgggaggtacagtgatgccttaatggaactagccaaa
ttgaatttcttaccccttggcactcggactcctgagagcagcgctgaagctttgcgttac
acctcactccatgtacaggcttgcgttcctgatcttcttagagaagctctcacctgcttg
gaccaagtaaatgatgcagatggaactgttcggagattgaagtcaaagattgcaaacttt
atcgcaaattcgttgccaagaaatctgcctcaggagctgtatgatcgagtggcacaaatc
ctatga
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