Physcomitrium patens (spreading earthmoss): 112283203
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Entry
112283203 CDS
T01041
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112283203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112283203
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112283203
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112283203
RNA polymerase I system
112283203
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
112283203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
HIPIP
Motif
Other DBs
NCBI-GeneID:
112283203
NCBI-ProteinID:
XP_024377399
UniProt:
A9SGU6
LinkDB
All DBs
Position
6:1428522..1430457
Genome browser
AA seq
113 aa
AA seq
DB search
MAGAAQVPTSFGRELRVCLRCSLMKTYDQFKENGCENCLFFNMDKDHDRVLECTTPNFAG
VISCMDPTSSWASRWLRISKFVPGCYALTVTGELSEEMQAICDDNNIRYVPRS
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgccgcgcaagtgccgacaagcttcggtcgcgaattgcgcgtttgtttgcgg
tgctctctcatgaaaacctacgatcagtttaaggaaaatggctgcgagaattgtttgttc
ttcaacatggataaggatcacgatcgtgtcttggagtgcacaactcccaactttgcaggg
gtaatctcatgcatggatccgacaagtagctgggcatctcgatggctgcgaataagtaaa
tttgttcctggttgctatgcgctcactgtcactggtgaactatctgaagaaatgcaggct
atttgcgatgataataacattcggtatgtgccacggtcttag
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