Physcomitrium patens (spreading earthmoss): 112283291
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Entry
112283291 CDS
T01041
Name
(RefSeq) protein SPA1-RELATED 4 isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112283291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112283291
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
112283291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_DCAF12
Pkinase
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_like
WDR90_beta-prop_4th
PK_Tyr_Ser-Thr
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
112283291
NCBI-ProteinID:
XP_024377593
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Position
1:complement(18100776..18105627)
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AA seq
876 aa
AA seq
DB search
MKELPGRESGGVTEASSAQGRSLAKATQERVPLTSDDVDSEGSEGVYGEEITVRQWLSKP
NREVDRVQSLHIFKQVLDFVDLAHGQGVMLRNIRPSCFLLSPLNRVAFIDSASTRSSSDQ
SYENSTGKGSASPERRHGDVGAGRRQAESSAHPPAGTVSSRPTSSSRDPDNRRPEQAVSC
PWLPDWSGSTGSEGERRAGSRDGVQSSEMNSSSGKRVDLNSSDGALRNGEDCFPQRQLLH
MEQAWYTSPEEHATGTSTYASDIYSLGVLMFEVLLSGHLQQLFCSFGSEVERARVMADLR
NRILPPRLLSECPKEASFCLWLLHPDPACRPKSRDIYNCEILSEAGDAIAERQAAVQLEE
KEAESEVLLEFLLRMQNQKQENARKLAQDVSRLSADIQEVERRRLALKKKRGPITKGENS
GQRRITGVNLQERKGILGKRPHPEDGIGGREKGIACTDGRGKMLSKSARFMSNFNHLEKV
YFSMNWRAGAPGMGMSKPSSRLGAQSLSIGCASNDDKKGISRAGEDNEEDWLGCFFDSLC
KYARYSRFEVKATLRHGDLLNTANMVCSLSFDRDEEYFATAGVCKRIKVFECDTILNEHV
DIHYPVVEMPCRSKLSSVCWNGYIKSHLASCDYEGVVQLWDANVPRVLRDYEEHEKRAWS
VDFSKADPTKLASGSDDGTVKLWSINQESSIGTIKTKANVCCVQFPPDSGHLLTFGSADY
KVYVYDLRTTKLPLCILASHQKAVSYVKFVDSVTLVSASTDNTLKLWDLTRANTTPHAQT
GCSLTYTGHTNEKNFIGLSIADGYIACGSETNAVFAYHKSLPMEMASHKFGCTDPITGRE
VEEDGGQFVSSVCWRGKSQTLVAANSMGNIKILEMV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttaccaggcagagaatctggaggcgttacggaggcctcatctgcacagggt
cgctcgctagcgaaagcaacgcaggaacgggtacctctgacctctgacgatgtagactcc
gaggggagcgagggagtgtatggggaggagatcacggtaaggcagtggcttagcaagccc
aatcgtgaagtagacagggtgcagagtcttcacatattcaagcaggtgctagattttgta
gacctcgcccatggccaaggcgttatgttgcgaaacattcgcccgtcctgcttccttttg
tctcccttaaatagggttgcattcattgattctgccagtactcgaagcagctcagaccaa
tcctatgagaattctaccggtaaggggtcagcgtctcctgaaagaagacatggtgacgtt
ggcgcggggagaagacaggcggagtcctcggctcatcccccagctggaacagtatcatcg
aggcctacatccagcagccgagatccagacaaccgaagaccagagcaggccgtgtcttgt
ccatggttgccggattggagtggaagtacaggatcagaaggggagagaagagcaggatcc
agagatggtgtacaatcctctgaaatgaattcctcgtctggtaaacgtgtggatttgaat
agtagtgacggggcgctgcgaaatggcgaagactgctttccacaaaggcagttgttgcac
atggagcaggcatggtatactagcccagaggagcatgcaactggcacgagcacatatgcc
tctgatatttacagtttaggggtgcttatgtttgaggtacttctatctggccatcttcag
cagttattctgctcatttgggtcagaggtggagcgtgcaagagttatggctgatttgcgg
aatcgtattcttccaccacgcctgttgtcggagtgtcctaaggaagcgtccttttgcctt
tggttgctgcacccagatccagcttgcaggccaaaatctagggatatttataattgtgag
atcttgtctgaagctggggacgcaatagctgagaggcaagcagctgtgcaattggaagag
aaggaagccgagtcagaagtacttttagagtttttgttaagaatgcagaatcagaagcaa
gagaatgctcggaagctggcacaagatgtgtcacgattgagtgcagacatccaagaagtt
gaaagaaggcggcttgcattgaagaaaaagcgtggtccgataactaaaggagagaatagt
gggcagagacggatcacaggtgtcaacttgcaagaacgaaaggggattttgggaaagaga
ccgcacccagaagacgggattggaggtagagaaaaagggattgcttgtacagatgggaga
ggtaaaatgttatcgaaaagtgctagatttatgagtaacttcaatcatctagaaaaagtt
tacttctctatgaactggagagctggtgcgcctggaatgggtatgtctaagccaagttca
aggctaggggcgcaaagtctgagtattggttgtgcctcgaatgacgacaagaagggaatc
tcaagagcaggagaggacaatgaggaagattggttgggctgtttctttgatagtttgtgc
aagtatgcacggtacagccgatttgaagtgaaggccactttgcgtcatggggatttattg
aacacagcgaacatggtttgctcattaagttttgatcgggatgaagaatattttgcaact
gctggggtgtgtaaacgtatcaaagtttttgaatgtgacacaatactcaacgagcatgta
gatattcactatcctgttgtcgaaatgccatgtcgatccaagttgagcagtgtttgctgg
aatggttatataaagagccacctagcctcttgtgactatgagggtgtggttcagttgtgg
gatgccaatgtgcctcgagttctgagggattatgaggagcatgagaaaagagcctggtct
gtagatttttcaaaggctgacccaacaaagttggccagtggtagcgatgatggaactgtg
aaattgtggagcattaatcaggagagcagcataggtacgattaagaccaaggccaacgtg
tgctgtgtccagtttccaccagactcggggcatcttttgacgtttggatcagctgactac
aaggtttatgtttatgatttgcgtaccaccaaactgcccttatgtattttagccagtcac
cagaaggctgtgagctatgtgaagttcgtggattcggttaccctagtttctgcatctaca
gacaacacactcaagctatgggacctgacgagagcaaatacaacccctcatgcccagact
ggttgttcgctcacgtatactggacatactaatgaaaagaattttattggtctatctatt
gcagacggttatattgcttgtggatcagaaacaaatgcggtgtttgcgtatcataaatcc
cttcctatggaaatggcatcccacaaatttgggtgcacagatccaatcacaggccgggag
gttgaagaagatggagggcaattcgtttcgagcgtttgctggagggggaagtcgcaaact
cttgtggctgcgaactccatgggcaatatcaagattttggaaatggtgtga
DBGET
integrated database retrieval system
