Physcomitrium patens (spreading earthmoss): 112283301
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Entry
112283301 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112283301
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112283301
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
112283301
NCBI-ProteinID:
XP_024377609
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Position
6:complement(19204168..19209977)
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AA seq
693 aa
AA seq
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MFRGIRKFVHELKEDILHDHDHPHACEQPHIAQQPHIPHHPHTSYSPHASGFIGASISLV
EQDKYVILDNGIVEMTLTKPGGIVTCVKYGGIENLLETHNKETNRGYWDLNWSPVGGRDT
FDVISGTSFSVVYKDDNRVEVSFYRPYDPNCGGIPVNIDKRFVLLRGVSGFYTYGIYDRP
CGWPAFNFNQNRVTFKLQKDKFHFMAVADDRQRVMPCPEDLTPTRCEQLAYPEAHVLTDP
VDPDLCGEVDDKYQYTMDNKDMKVHGWASDDPRVGWWIISPSNEFRNGGPTKQNLTSHVG
PTCLAVFQGAHYAGSDLNPGFEEGEPWEKVFGPVFIYLNSAPPGTPHSALWENAKAQAAE
EESAWPYSWAGSPAFLKAEERGTLSGRLLVSDPFQPPYTWGAKDAYLGLAAPGEAGSWQT
ESKGYQFWTQADADGCFCIRNIRPGVYDLYGWVPGVPGDFKYAQGSIHIQPGAVVDVSDI
TYSSPRDGPTVWEIGFPDRTAKGFFVPDANPKYANKLFLNHPEKWRQYGLWERYTDLYPT
EDLVYTVGQSDWRKDWFFAHLTRMNPDGTYSPTTWEIRFELPDVVTGIPYKLRIASAAAN
VGAIQVFVNNMDRTKKPLFDTMQYGKDNAVARHGIHGLYKLWNIDVDSNLLQAGPNVIYL
TQRKATGPFNAIMYDYLRLEAPVRGCHSDVDSD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagggattcgtaaatttgtgcatgagctgaaagaggatatcttgcacgatcat
gaccatcctcatgcttgtgagcagcctcacatcgctcaacagcctcatattcctcaccac
ccgcataccagctattcccctcatgcaagtggattcatcggcgccagtatctccctcgtt
gagcaggacaaatacgttatcttggacaatgggatagtcgaaatgacactcaccaagcct
ggtgggatcgtgacctgcgtcaaatatggtggaatcgaaaacctccttgaaacccataac
aaggaaaccaacagaggatactgggatttgaactggagcccagtcggtggaagggatacc
tttgacgtcatcagtggaaccagcttcagtgtcgtgtacaaggacgacaacagagtagag
gtttcattttaccgaccgtatgacccaaattgtggaggcatacctgttaacatcgacaag
cgatttgtactcctgcgaggggtttcaggtttttacacttacggaatatacgaccgacca
tgcggctggcctgcattcaatttcaatcaaaatcgagtcacgttcaagctccaaaaagac
aagttccatttcatggccgtggcagatgaccggcagagggtgatgccttgccctgaggac
ttgactccgaccaggtgtgagcagctcgcttaccctgaggcacatgtgcttacggatcct
gttgatcccgatctttgtggtgaggtggacgataagtatcagtacacgatggacaacaaa
gacatgaaagtgcatggctgggcgagcgacgaccctagggttgggtggtggatcatctcc
cctagcaacgagtttcggaacggtggtcctacgaagcagaacctaacatcacatgttggc
ccaacatgtctggctgtcttccaaggtgcacattatgctgggagtgatctgaaccccggt
tttgaggagggggaaccgtgggaaaaagtttttggccccgtcttcatctacctcaactcg
gcaccgccgggtactccgcacagtgccttgtgggaaaacgccaaggctcaagcagcagaa
gaagagtcagcatggccctactcctgggctggttcacccgccttcttgaaggcagaagag
cgcggtactctgagtggccggcttcttgtttcggatccgttccaaccaccctacacatgg
ggagctaaggacgcttatttgggattggcggctccaggcgaggcggggtcatggcaaact
gagagcaagggctaccagttctggacccaagccgatgctgatgggtgcttttgcatacgc
aatattcgccctggagtgtacgacctttacggatgggttcctggtgttccgggagacttc
aaatacgcacagggttccattcatatccaaccaggcgcggtggttgatgtcagtgacata
acttactctagtcctcgagacgggcctaccgtgtgggagatcggcttccctgaccgcaca
gcgaagggcttttttgtcccggatgcgaaccctaaatatgccaacaagctcttccttaac
cacccagagaagtggcgtcaatacggcttgtgggagcgatatacagatctttaccctaca
gaagacttggtttacactgtgggccaaagtgactggcgaaaggattggttctttgcacat
cttacgagaatgaatcctgacggcacatactcacccacaacttgggagattcgttttgag
cttcccgatgtagtcaccggcatcccttacaaactccgaatcgcatctgcagctgccaac
gtaggtgccattcaggtgttcgtgaacaacatggaccggacgaagaaacctttgttcgac
acaatgcaatacgggaaagacaatgctgttgcacgccacggcatccatggactctacaag
ctgtggaacatcgacgtggattcaaaccttctgcaagctggccccaacgtcatatacttg
acgcaaaggaaagccacagggcctttcaatgcgatcatgtatgattatctgcgcctggaa
gctcctgttcgtggctgccattcagatgtggattcagattga
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