Physcomitrium patens (spreading earthmoss): 112283575
Help
Entry
112283575 CDS
T01041
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112283575
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112283575
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112283575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_4
RINGv
zf_RING_Vps8_fungal
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112283575
NCBI-ProteinID:
XP_024378224
LinkDB
All DBs
Position
6:complement(4761771..4763883)
Genome browser
AA seq
355 aa
AA seq
DB search
MPSVVGESGFLSRITNQKEVMVSLACLSLVILTLLFGHGSAAVLLFNTKNESRSFPDMEA
AFTPSIPSGGVAGILHEANPLDACSPLKNLIPKGEPLPPFVLVSRGSCNFDKKVKNAQDA
GFQAAIVYNSMDFVGDLVIMSGSPEGIDIYAVFVSWLTGQALLGAVGDNNTCTLVPYIED
TAWSIMVVSSISLLAISAVLSTFFFVRRHSLRHRGSRLLSREPSGMNARDVHALPTLIFK
AVGGAATGEMCAICLEDYESGEKLRLLPCQHDFHVGCIDQWLLTRRRFCPICKQDASSAP
VHPSATETTPLLVAPSHIFSVPATASAATQTSPVGSPTIQTIQSSPSDVSGENLC
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagttgtaggggaatccggttttctcagtagaattacgaaccagaaggaggtg
atggtctctttagcttgtctctccctcgtcattctcaccctcctatttggccatggaagc
gcggctgttcttctgttcaacactaaaaatgaatctcgatcttttccggacatggaagct
gccttcactccttccattcccagcggaggcgtagctgggatcttgcacgaagcaaatcca
ctcgacgcatgctcaccccttaaaaatctcattccgaagggagagccattgcctcctttt
gttttggtatcacggggcagttgtaattttgataagaaggtgaagaatgctcaagatgcc
ggctttcaagctgcgattgtgtacaatagtatggattttgtcggtgacttggttataatg
tcaggttcacctgagggtattgacatttatgcagtatttgtctcttggcttactggacaa
gcccttttgggtgctgtcggtgacaacaatacatgtaccctggtaccatatattgaggat
accgcctggtcaatcatggttgtgtcttcgatctcgctccttgccatttcagcggtgttg
tctacgtttttctttgtccgtcggcatagcttacgacatcgcggttctcggttattatct
agggaaccctctggaatgaacgcacgggatgtgcacgcattgcccaccttaattttcaag
gctgttggaggagctgctactggagagatgtgtgctatctgcttggaggactatgagagt
ggagaaaaactgcgactcttaccttgtcagcatgactttcacgtcggctgtatagaccag
tggctactcacgcggagacgtttttgtccaatatgcaagcaggatgcaagctcagcacct
gttcatccatcagctacagagacaacacctctgctcgttgctccaagtcacattttctcg
gtccccgccaccgcttcagcagctactcagacatcacctgtaggctctcctacaattcaa
accatccaatcatcgccttcagatgtgtcgggagagaacctatgctaa
DBGET
integrated database retrieval system
