Physcomitrium patens (spreading earthmoss): 112284015
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Entry
112284015 CDS
T01041
Name
(RefSeq) syntaxin-71 isoform X1
KO
K08506
syntaxin of plants SYP7
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112284015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112284015
Membrane trafficking [BR:
ppp04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
112284015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF16
HAUS-augmin3
Fusion_gly
Spc7
Motif
Other DBs
NCBI-GeneID:
112284015
NCBI-ProteinID:
XP_024379241
LinkDB
All DBs
Position
6:15105404..15109187
Genome browser
AA seq
305 aa
AA seq
DB search
MSTIDLLTRVNGVIKKYEKYDTDNIRGPEIASHDYFLRLYKSIEDDLNGALKKAAEAESE
KNRAVIATLNADLRRTKAALRSELPKLHKLAAKKVKGVPPEEILTRPNMALALSARIEEV
PDGVSVSKKKVAKGTPLEIKIDNYSPEDILRQGVKDHSVESKGFQEEFETRRKKQDEGFM
AIEQGLNTLKDMAQDIGEELNKQEQLVDEADSKIDKAGSDLKSTNSRLKESLTAVTVQVI
DTLLSLPLSRLPDSATLSLSLSLWSCSLTPHHAFKWSPALYMFKTVTEKPPLKPIHYSTG
SFVCQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgattgatctgctcacacgggtgaacggtgtcatcaaaaagtatgaaaaatat
gatacagacaatatcagaggaccagaaattgctagccacgattactttctaaggctttat
aagagtattgaagatgacctaaatggtgccttgaagaaagctgccgaggcggagtctgaa
aaaaaccgagctgtcatagccacactcaatgcggatctccgtcggaccaaagctgcattg
cgcagcgagcttccgaagctccacaagcttgccgcgaagaaggtgaaaggggtaccacca
gaggaaattcttactcgacccaacatggcgttagccttatctgccagaattgaggaagtt
ccagatggggtcagcgtaagcaagaagaaagtcgccaagggcacgccccttgagataaaa
atcgataactacagccccgaggacattcttcggcaaggcgtcaaagatcattccgttgag
tcgaagggttttcaagaggagtttgagactcgtaggaaaaagcaggatgaaggatttatg
gcgatagagcagggcttaaacaccctcaaggatatggctcaagacattggtgaggaattg
aacaagcaagaacagctagtggacgaagcagactccaagattgacaaagcaggctcagat
ttgaagtccacgaactccagactcaaagagagcctgacagcggtaactgtacaagtcatt
gacacactgttatctctgccattgtcacgtctcccagattctgcaactctctctctctcc
ctctctctgtggtcttgcagcctgacgccacaccatgcattcaaatggtcaccagcacta
tacatgttcaaaacggtgactgaaaaaccacccctcaaacctattcactactccacaggg
agttttgtttgccagtaa
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