Physcomitrium patens (spreading earthmoss): 112284034
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Entry
112284034 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112284034
Enzymes [BR:
ppp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
112284034
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
112284034
Prokaryotic type
Methylthiotransferases
112284034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
112284034
NCBI-ProteinID:
XP_024379293
UniProt:
A0A2K1KF57
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All DBs
Position
6:complement(6518313..6523744)
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AA seq
680 aa
AA seq
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MEDIEDMIGDFGGAPLGLHLPKTDSTSGSGRRNGTNAVTIKPRRRISAHSGGVRDAASNS
LTCVDTAGETTSAPDKVPGTETVYLKTFGCSHNQSDSEYMAGQLSDYGYSVTDAPDGADL
WLINTCTVKNPSQSAMENLIRKGKDAGKPLVVAGCVPQGDKNLKDLEGVSVVGVQQIDRV
VEVVEETLKGHEVRLLRRSSLPSLDLPKVRKNKFVEIVPINVGCLGACTYCKTKHARGHL
GSYPLASLVDRVKGVVAEGVKEIWLSSEDTGAYGIDLGTDLPTLLNALVDVLPKDRSCML
RIGMTNPPYILKHLESIAAILNHPCVYSFLHVPVQSGSDNVLCAMNREYTVSDFKKVADT
LLRLVPDLHLATDIICGFPGETSEDFEATMALVKEYKFSQLHISQFYPRPGTPAARMKRV
PTAEVKKRSRELTTLFESFNPYSGMEGKEQRVWVTDVASDGVHLVGHNKSYVQVLLPEAE
GLMGSSVDVKIISVNRWSVMGEVLKPAKPIKQKRTYSLSSLLRASSMPVKPTTAKREVKP
AIVERACASGDEPCSCSSIAKDSPKFEGRSEVTDSCACGTESCSSNQKDDKEDAYNIFAE
VCSLFDKNGIKLDSLERNRSLEKHKAKFILGEDDGGTVDIIQDTETVRSARFDWLLITGL
VFGLTGILSGLFYMGLSSGS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgaggatatgatcggggatttcggtggtgcgccgctgggactgcactta
cccaagaccgattccacgtccggctcgggtcgtcgcaacggcaccaatgctgtgaccatc
aagccgcggcgtagaatttcggcgcattcgggcggcgtgcgggatgctgcatcgaactca
ttaacgtgtgtggacaccgccggcgagacgacgtccgctccggataaagtgcccggaacg
gagacagtctacttgaaaacttttggctgttcacacaatcagagtgacagcgagtacatg
gctgggcagttgtcagattatggatatagtgtcacggatgctcccgacggtgctgacctg
tggcttatcaacacctgcacggtcaagaacccaagtcaatcagctatggagaacctcatt
cgcaaaggtaaagacgccgggaaaccacttgtagtagcgggctgtgttcctcaaggtgac
aaaaacctgaaagacctagaaggagtcagtgtggtgggggttcaacaaattgatagagtt
gttgaagttgtagaagagacactcaagggccatgaggttcgactacttcgacgcagttct
ctcccttctcttgatcttcccaaagttagaaagaataagtttgtggagatagtgcctatc
aacgtgggttgtctcggtgcatgtacttactgtaagaccaagcatgcacgtggacatctt
gggagctatcctttggcatcgttggtggatagggtgaagggagtggttgccgaaggtgtg
aaggagatatggctcagtagtgaagatactggcgcttatggaatagatttgggaacggat
ttgccaacacttctcaatgcattggtggatgttcttcctaaagaccgtagctgcatgctg
cggattggcatgactaatccaccttacattttgaaacatcttgagagcattgctgccatt
ttgaatcatccatgcgtttactcattccttcatgtccctgtgcagtctggcagtgacaat
gtcttgtgtgcaatgaatcgagaatacacagttagtgatttcaagaaagtagcagacact
ttgctgcgtcttgtgccagacttgcacctcgcaactgacatcatatgtggatttcctgga
gaaacttctgaggactttgaagctacaatggcattagtaaaagaatataaattttctcaa
ttgcatatatctcagttctatcctcgcccaggtaccccagctgcaaggatgaaacgagtt
cctacggcagaagtaaagaagaggagtcgtgaactcactacactctttgaatccttcaac
ccttattcagggatggagggcaaagagcaaagagtgtgggtgactgatgtagcttctgac
ggggttcatcttgttgggcataacaaatcctatgtccaagttctactacctgaggcagaa
ggacttatgggcagcagcgttgatgtaaagatcatctctgtgaataggtggtcagttatg
ggtgaggtccttaagcctgccaaacccatcaagcaaaagagaacatattccttgtcctcc
ttgctcagagccagtagcatgccggtgaagccgacaactgcgaagagagaggtgaaacct
gcaattgtggagagagcgtgcgcatcgggagatgagccttgttcttgctcatcgattgcc
aaggatagcccaaaatttgaaggaagaagtgaggttaccgactcttgtgcttgtggcact
gaaagttgttcaagcaaccagaaagatgataaagaggacgcgtacaacatctttgctgag
gtttgcagtttgtttgataaaaatggcatcaagttggacagtttggaacgtaatcggtcc
cttgagaagcacaaagcaaagtttatacttggtgaggatgatggtggaacagtcgacata
attcaggatacagaaactgtgaggtcagcgaggtttgattggttgctcataacagggctg
gtttttgggctaactggaatcctttcgggtcttttttacatggggctctctagtggtagc
tag
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