Physcomitrium patens (spreading earthmoss): 112284232
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Entry
112284232 CDS
T01041
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112284232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112284232
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112284232
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112284232
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112284232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
BCAS3_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
112284232
NCBI-ProteinID:
XP_024379631
UniProt:
A9S1Y6
LinkDB
All DBs
Position
7:complement(5416751..5421612)
Genome browser
AA seq
391 aa
AA seq
DB search
MSNLQASDRRVLSLAFNQDNSCLAIGTQDGFKIFNCDTCQCCYKRSEGAINVVEMLFSTS
LVAVVGAGEQPALSPRRLSVFNTITDVLSAELNFVSSILCVRMNRKRLVVVLERKTYIHD
LGQLTILHTIDTVSNSRALCALSPNHENCYLALPASTSNGTVLVFDALDLHAVCQIQAHR
SPLAAMSFSSDGLLLATASDQGTVIRVHSIPQASKVHTFRRGSYPVTIYSLSFGPPSQVP
QLLAASCASGTIHVFKLGSYSKPRTEDPLGNVGQTSNGMAAGLLASVIPNSMSDMVESER
CIVTIKNGSPPNVRSHCAIAAHVEDSSEDGDEAPTSTSSSNRARIFVVTTGGFFHEWSIT
VGQGKESSCTLQREVAILSSSLSDEISAHFV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctgcaggcgagtgatcgccgggttctttctctcgcattcaatcaagacaac
agttgtctggcgattggtacccaagatggcttcaagatttttaattgcgacacttgtcaa
tgctgctataagcgatctgaaggagcaatcaatgtggtggagatgctgtttagcaccagc
ttggtggcggttgttggtgctggggaacagccggcgctttctcctcggcgactgagcgtc
ttcaacaccatcactgacgtactttctgcggagctcaactttgtgtcgtccattctatgt
gtacgtatgaatcgtaaaagattggtggtagtactggagcgtaaaacgtatattcacgac
cttggtcagttgacaatcttgcacaccattgacacagtttcgaattcccgagccttgtgt
gcattgtctcctaatcatgaaaactgctacttggctttaccggcaagcacatccaatggg
actgtattggtatttgacgcgttggatctccatgccgtctgtcagattcaagcacatcgg
tcccccctagcagctatgtctttctcctcagatggcttgcttctggccacagcctctgac
caaggcacagtaatcagggttcatagcataccccaagcctccaaggtgcacactttccga
cgtggaagttaccctgtcacaatttactccttgtccttcgggccaccttctcaagttcca
caacttcttgctgcttcatgtgcttctggtacaattcatgtgtttaagttggggagttat
tcgaaacctcgaactgaagatccactaggcaacgtgggccaaacaagtaatggcatggct
gcgggactgctggcatcagtaataccaaactccatgagtgacatggttgagtcagaacgc
tgtattgtcacaatcaagaatggatctcctcctaatgttcgcagccattgtgccatagct
gcacatgtggaagattcgagtgaagatggagatgaagcgcctacttcgacctcaagcagc
aatagagccagaatcttcgtagtcacaacaggtggcttctttcacgaatggtcaattacc
gtgggacaaggcaaggaaagtagttgcaccttgcaacgggaagttgctatcctgagcagt
agtttatcagatgaaatatcagcacactttgtgtga
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integrated database retrieval system
