Physcomitrium patens (spreading earthmoss): 112284606
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Entry
112284606 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112284606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112284606
Membrane trafficking [BR:
ppp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112284606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
Clathrin
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40
zf-C3HC4
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
112284606
NCBI-ProteinID:
XP_024380311
UniProt:
A0A7I4E6K3
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All DBs
Position
7:14604409..14614450
Genome browser
AA seq
1948 aa
AA seq
DB search
MQAEDYELDALLLAQSSDEEGNSDISELERNILDQIIDSTDLNNDVPFSTILASFEGLNA
SLLGSQASFGHESVTNGGISGLDASPHLHSLEMSSLVEDSCSANFVETRSKDYSSLESVA
VERGHVLLDSDEMSRSPKLVLESEGQVAGVRIMSRPGAALAAAAAVSRQMASSPSTMLRS
RRTKSVDIRMPALSSRKQPDLNLASGEIIKSRELFLSDIPAKPSELQEVPSSLGGTRDSS
LTQSVDGCINLTNDYPLSEPSLTASTTVHGVMICSDADENFQSNVTSSLVHETENELVTE
NSSYQEQGHTIDDIVSQLHEEIIDNIHSKDAVQIVKNQGEFHDVGGGSETEHMMIGQKSE
FIHEKSKELSESPYVRVDQEDKNNQHTALDRAEEYEKMVTKAGACLEEDAAAQTSSLDFI
KQGQSRTGILHVDSTGSLSQALGSTAMRRDFGFTQALAVHANFIAVGMSKGAVLVTPSKY
SPTRAIDDADAKAALLEPPDKAQMAVTVMCFSDHGDHLLVGYAGGTISLWDVPRVKLNMS
IVDQHAGAIVHAFFLLQADTEMRQMRAVTADCKGRVLLHTFTFRPLLRRFSVLSQIVDIE
QDMGSVLAISPLNVEDLTHSTANMNSANKSTDAGHKFLFNEVGSVEPTEPARCGIVVIVT
RSAIFAASLIPTYARFATLHRPARLREGAIPYTSWQHSRKTYAEVGYDTVDNDPNWPVLA
VAWDRRVIIAHLNLKISELIVDVEWDIDNAAAGIAWLEDKVLVVATVKGQLLVYKKDGTE
IERATLKDVQGNVGALMYHTHFVNEFENPEKAFHNTIGVRGAALYLLGPSQLWRARLLPW
FDRLKLLKGSGDWMEAFRFALELFDGKAESVTGLPRRLEAMRHAIRDTLLGLLFSYLDEV
FAYLALGSSSAVFDSNPIPAETESGEAVESPTGIETWGRANLGLKMIAEPHEHYAKIGRM
SIEFCVHIGKTEVICEDIYSRFESVGQKSTFLELLEPYILRDMLSGLAPEVMQAFVDHYS
HCGWLERVEECVLHMTISSLDFNQVIKLCRKHGLYTALIYLFNSGLDDFTSPLEELLIAA
QSPSSRIEPRTLGYKMLVYLKACFNGLAFPLGRGTLPIDRLPTLRAELLQFLLDVRPTLA
EIVDSSCNAKGCAYPRLGYLLKLDTQATLVVLRSAFPVHGVLSIGRQGWAYADAAEASII
DYRESSDLPNNFQVIDEGVRYLQAVVIAMTQNLDLRAYDSSKILDSDSQNWLSADDQGVI
LEFVAEYVASRHVVVGRTTLKCILEYVTSPIAEKVMGKSTRQNLLIKLLKSVPESDWDFD
HSLLCAQRAGLWQASAWLHVKYGSSVAALDCYLQDKYVHEPVFSYVMQKLDATTGLKGGV
LAEFRKAVLDRICKLMLHSSKGTLWIVLTHFSTSNEQVMEALESDETLLFAFLKDLMNAI
WGVPTSFVVSGGVRSSSCLQDVKSKVHNEGNRDKFSSRWEFLIKLDKLVRRSGFQCTDKM
VEQYLQLLCRLEPESVVEFLARCEQYNVDNCLRMVQKYGIADAAILLLERAGDISGALAL
LIKDLDSSLQIMLQSLISEKSDRFNMEMHSFYSMSETSAVESALHAGVALCLRNTQRLSS
EEACSLWFRLLDSVVEALRNLTPAFLEGTTVGLSTASSDVIGERVHSVQYKMMDDNKYKL
VRMWLVHLVGSTVTAMQDHVSPQILLQQIISNYGSHPLGDFRAAICNLLSAYTYEFTILG
KAKQLVEESLHHSLYMLLRGSTHAYALSNSKCCICKLELVGVHSSNMNELIGVSSSSQST
STSEVCSDGLQVLTCGHAAHAFCISGQLGGGGKRSLLCPLCCRNLKFLASEEKISSIQDT
QSQSSTDIRPRMQLLWKNKDQEISSIASTNKSRLQILNELRDGKGVQMFGPRLHLSVAPP
KKPKGSHSQFDKNGFGQKTYMHRVSVGL
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgaggattatgagcttgatgctcttttacttgcacagagtagtgatgaagaa
gggaattcagatatatccgagcttgaacgcaatattcttgatcaaataatcgattcaacg
gatcttaataatgatgttccattttcgacaatcttagcgtcttttgagggcttaaatgcc
tcattgcttgggagtcaagcttcttttggacatgaaagtgttacaaatggaggcatttct
ggactggatgcatcgccgcatttgcattcccttgagatgtctagtcttgtagaggattcg
tgcagtgctaacttcgtggagacccgatcgaaggattactcaagtttggagtctgtcgct
gttgaaagaggacatgtgcttttagacagtgacgaaatgtctaggtcaccaaaactggtg
ttggagtccgaaggtcaagttgcaggagttcgaataatgtcgagaccaggagcagcctta
gcagctgcggctgcagtttcgagacaaatggctagttctccatccacaatgttaaggagc
cgaagaacgaagtctgtagatattcgtatgccagctttatcgtcaagaaagcagccagat
ttgaacttagcatcaggggaaatcattaagtcgagagagctttttctaagtgatatccct
gctaagccgtcggaattgcaggaagtgccttcctcacttggaggaactcgagacagttct
ctcacgcaaagtgtcgatggttgtatcaacttgacgaacgattatcctctttcggagccc
tctttgacagcatctactactgtgcatggagttatgatctgtagtgatgcagatgagaat
ttccagtcgaatgttacatcatcattagttcatgaaactgagaacgagcttgtgactgaa
aattcttcttatcaagaacagggccacactattgatgacattgtatctcaattgcatgag
gaaattatagacaacatccactcaaaagatgcggtgcaaattgtaaaaaatcagggagaa
tttcacgatgttggtggtggatcagagacagagcatatgatgataggacagaagtctgaa
tttattcatgaaaagtcgaaagagctttcagaaagtccatatgtcagagtagatcaggag
gacaaaaataatcagcatactgcattagatcgggctgaagaatacgagaaaatggtcact
aaagctggagcttgtttggaagaagatgccgcagctcagacatctagtttggactttatc
aagcaagggcagtcgaggactggaatattgcacgtggattctactggctctctctctcaa
gccctcggttcaactgccatgcgacgtgattttggcttcactcaagctctagccgtgcat
gcaaatttcatagctgtgggcatgtcgaaaggggcagtccttgtgactccaagcaaatat
tcacctacccgtgcaattgatgatgcggatgccaaggccgctcttctagaaccgccagat
aaggcgcagatggctgtgaccgtcatgtgcttcagcgatcatggtgaccatctgctggtc
ggttatgcgggaggcaccatatccctctgggatgtgccaagggtgaaattgaacatgtcc
atagtagaccaacatgctggagccatagtgcatgcgttctttcttttgcaagctgacaca
gagatgcgacagatgagggctgttactgctgattgtaaaggacgcgtgttattacacacg
ttcactttccggccacttttacgccgtttttcagttctttctcagattgtggatatcgaa
caggatatgggttccgtgttagcaatttcacctctaaatgtggaagacctcactcacagt
acagcaaacatgaattcagccaataaatctacggatgctggtcataagttcttgttcaat
gaagttggttcagtggaaccgaccgaaccagctagatgcggaatagttgtcattgttact
cgttcagccatttttgcggcatctttaatcccaacttatgcacgttttgccacactacat
cggcctgctcggcttcgagaaggagcgatcccttatacctcatggcagcattccagaaag
acatatgcagaagtaggatatgatacagtagataatgatcctaactggccagttctggct
gttgcttgggatagaagagttattattgcacatcttaacctcaaaatcagtgaactgata
gttgatgttgaatgggatattgataatgctgctgctggaatagcatggctggaagacaag
gtgttagttgttgcgactgtaaaagggcagcttctagtgtataaaaaggatggcacagag
attgaacgagcaaccttgaaggatgttcaaggaaatgtgggggcacttatgtaccatact
catttcgtaaatgaatttgagaatccagagaaagcatttcataataccataggtgttcgt
ggtgcagctctatatttacttgggccttcgcaattgtggcgggctcggcttctgccatgg
tttgaccgcttgaagcttctgaaaggttccggtgattggatggaagcctttcgctttgct
ttggaactatttgatggtaaagcagaaagtgtgacaggtcttccaaggagattggaagcg
atgcggcatgctatcagagacacactgcttgggcttcttttttcatatcttgacgaagta
tttgcttatctagcacttggttcatcctcggccgtctttgacagcaacccgattcctgct
gagactgagagtggagaggctgttgaaagtcctactggtattgagacttggggaagagcc
aacttagggcttaaaatgattgccgagcctcacgagcattacgctaaaataggacgtatg
tcaattgaattctgcgtacacatcggaaagacggaagttatatgtgaggacatatacagc
agatttgaatccgttggccaaaagagcacctttttggagttgcttgagccgtatatcctc
agagacatgttgagtggtcttgctccggaggtaatgcaagcttttgtagaccattacagt
cattgtggttggttagaaagagtcgaggaatgcgtgcttcatatgaccattagctctctg
gatttcaatcaggttattaagttatgccgtaagcatggattgtacacagcgcttatttat
ctgttcaacagtggtttagacgattttacatcacctttggaagagcttctgatagctgca
caatctcccagtagtcgtattgagcccaggacacttgggtacaagatgctcgtatacctg
aaagcctgcttcaacggacttgcatttcctttgggacggggtaccctgccaatcgatcgt
ttgccgacattgcgggcagagttgttacaattcttgcttgatgttcgaccaaccttggca
gaaattgtagactcaagttgcaatgccaaaggttgtgcatacccaaggctgggatatctt
ctgaagctggatactcaagcgaccctggttgtgttaagatctgcttttccagttcatggg
gtcttgtccattggcaggcaaggatgggcatatgccgatgcagcagaggcatccattata
gactacagagaatcctcagatttaccaaacaattttcaggttattgatgaaggggtgaga
tatttacaagctgttgttattgcaatgacacagaacttagacctgagagcatatgattct
tctaagattttagattctgattcgcaaaattggctatcggccgatgatcaaggggttata
cttgagtttgtggccgagtatgtggcgtcgaggcacgttgttgttggtcgtaccaccctg
aagtgtattctggagtacgtgacatcacccattgcagaaaaggtcatggggaagagtact
agacagaatctattgataaagttgttgaaaagcgtgcctgaatcagattgggacttcgat
cattctcttttatgtgcacaacgtgctggactctggcaggcaagtgcttggctgcacgtc
aaatatggttcatccgtagcagctttggattgttaccttcaggacaaatatgtacatgag
cctgtgttctcttatgtgatgcaaaaactcgacgcaacgaccggcttgaaaggtggtgtc
cttgcagaatttcggaaagctgttttggatcgaatctgcaaactcatgctgcatagtagc
aaaggtactctttggattgtgttaactcacttcagcacttcaaatgagcaagtgatggag
gcattggaatctgatgagaccctgttgtttgcattcctcaaagaccttatgaatgcaatt
tggggtgtcccaacttcttttgtagtatcaggaggtgtccgatccagttcatgtttgcaa
gatgtcaagtcaaaggttcacaacgaaggaaacagagacaaatttagttctcgttgggaa
ttcttgatcaagttggacaagctagttcgacgttcaggctttcagtgtactgataagatg
gtcgagcaatatcttcagcttctgtgtagattggaacctgagtcagtcgtggaatttctc
gcaagatgtgaacaatataatgtagataattgcctcagaatggttcaaaagtacggcatc
gccgacgcagccatactattgctggaacgtgcaggggacatatcaggtgctcttgcactt
ttgatcaaagatctagattctagtttgcagatcatgctgcaaagtctcatttctgagaag
tcggatcgttttaatatggaaatgcactcattttactctatgtccgagacgtctgctgtc
gagtcagcacttcatgctggagtagctttgtgtctgcggaatacgcagcgactgagttct
gaggaagcatgttctctttggtttcggttacttgatagtgtggtggaggcactacgtaat
cttacaccagcttttcttgagggcacgacagtagggttatctactgcctccagtgatgtg
attggagagcgagtgcattctgtacaatataaaatgatggacgacaataaatacaagctt
gtgaggatgtggttggtgcatctggttggtagcactgtaacagcaatgcaggatcatgtt
tcgccgcaaatcctcttgcagcagattatatccaactacggtagtcatcctttgggggac
tttcgagcagccatttgcaacttgctgagtgcttacacctatgagttcacaattttgggt
aaagccaagcaactggtcgaggaatctctacaccatagtttgtatatgttgctaagaggc
tccactcacgcatatgctctcagtaattcaaagtgttgtatttgcaagcttgagttggtg
ggtgtacactctagcaatatgaacgagcttattggagtttcttccagttcgcagtcaacc
tcaactagtgaagtgtgttccgacggtctacaggtccttacttgtggacatgctgctcac
gcgttttgcataagtggccagttgggagggggagggaagaggagcttattgtgtcctttg
tgttgtcgcaacttaaaatttcttgcttcagaggaaaagatatcaagtattcaagataca
caatcacaatcatcgacggatatcaggcctcgaatgcaacttttatggaaaaataaggat
caagaaatttcatcaattgccagtacaaataagtctcggctacaaatactaaacgagtta
agggacggaaaaggtgttcaaatgtttgggcctcgtttgcatctttctgtagctccaccg
aagaaacccaagggttctcattcccagtttgataaaaatgggtttgggcaaaagacatac
atgcatagggtttcagtgggattatag
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