Physcomitrium patens (spreading earthmoss): 112284607
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Entry
112284607 CDS
T01041
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112284607
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112284607
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112284607
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112284607
Peptidases and inhibitors [BR:
ppp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112284607
Ubiquitin system [BR:
ppp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112284607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
RA
Motif
Other DBs
NCBI-GeneID:
112284607
NCBI-ProteinID:
XP_024380320
UniProt:
A9S238
LinkDB
All DBs
Position
7:4638828..4649666
Genome browser
AA seq
1115 aa
AA seq
DB search
MTVIAAPPEEDDDMLVPPQDFNDVIEPMEVVGQGEGVVTVENQLVDDPQTGKFTWPIENL
SKINLRKHYSETFTVGGYKWRVLLFPKGNNVDHLSIYLDVADSAQLPYGWSRFAHFTLAV
VNQIDPKLTVKKDTQHQFNVRESDWGFTSFMPLHDLNDPSRGFVVNDTLIVEADVNVRKV
VDYWAYDSKKETGFVGLKNQGATCYMNSLLQTLYHLPYFRKAVYHMPTTENDVPSNSIPL
ALQSLFYKIQYSDTSVATKDLTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTAVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYESFDKYVEVERLEGENK
YHAEQFGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENG
KYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEELKRA
LEEQYGGDEELPQTNPCFNNTPFKFTKYSNAYMLVYIREADKDKVVCNVDEKDIAEHLQI
RLKKEQEEKERKRKEKAEAHLYTIIKVGRDEDLQNQIGKDIHFDLVDHEKVRSFRIQKQT
PFTQFKEEIAKQLGVPVECQRFWLWAKRQNHTYRPNRPLTDQEEAQTVGHLKEASNKAHN
AELKLFLEVQRLPGADSVPIPPPIKTKEDVLLFFKLYNPEKEELRYVGRSYVKASGRPAD
ILERLNEMAGFPPNEEIQLYEEIKFEPNVMCEHIDKKSTFRASQLEDGDIICYQRALTRG
EEDVCRYPDVPSFLEYVRNRQNVHFRRLEKPKDDEFCLELSKQHTYDDVVERVAEKIGLE
DASKIRLTSHNCYSQQPKPQPIKYRGVERLSDMLVHYNQTSDILYFETLDLPLPELQGLK
TLKVAFHNAKTEELSVHNIRLPKQSTVGDVVNELKGKVELSSPRAELRILEVFYHKIYKI
FPLNEKIENINDQYWTLRAEEVPDEEKELGPQDRLIHVYHFTRDASQNHMVQNFGEPFFL
VVRESETLVEVKGRIQKKLLISDEEFSKWKFAFLSLGRPEYLQDGDVVAARFQKRDTYGA
WEHYLGLEHTDSAPKRSHTTNQNRHNFEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatcgcggcaccgcctgaagaggacgatgatatgttggtgcctccccaggac
ttcaacgacgtgattgaaccgatggaagtggtagggcaaggagaaggtgttgttactgtg
gagaatcagcttgtggatgatcctcagacgggaaaattcacgtggccaatagagaatctt
tcgaaaattaatttgagaaagcattactcagaaacatttaccgttggtggttacaaatgg
cgggtgctgttatttccgaaaggcaataatgtggatcatctttcgatatacttggatgtt
gctgattctgcacaactaccctatggctggagcagatttgcacattttactcttgccgtt
gtaaatcagattgatccaaagttgactgtcaagaaagatactcagcatcagttcaatgta
cgtgaaagtgactggggattcacatcgttcatgcctttacatgacttgaatgatccatca
cgaggtttcgtggtgaatgatactcttattgtagaagctgatgtgaatgttcgtaaggtg
gttgattattgggcgtacgattcgaagaaggaaacaggatttgttgggttaaagaatcaa
ggagctacatgctacatgaattctctcctccagacattgtatcatctgccttacttccgg
aaggccgtgtatcatatgccaactactgagaatgatgttccatccaacagcattcctcta
gctctgcagagcttattctacaaaattcagtatagtgacactagtgttgcaacgaaggat
cttactaagtctttcggatgggatacatacgactcctttatgcaacatgatgttcaggag
ctcaatcgagttctctgtgaaaagttggaagataaaatgaagggtaccgctgttgagggc
acaattcaacaactgtttgaaggtcatcatatgaactacatagagtgtatcaatgttgac
tacaagtcaacacgcaaagagtcattttatgatttgcagcttgatgtgaaagggtgcaag
gatgtttatgaatcttttgacaagtatgtcgaggtagaacgcttggaaggcgagaacaag
tatcacgcagaacaattcggattgcaggatgcaaaaaaaggagtcctatttatagacttc
ccccctgttcttcagctccaactgaaacggtttgaatacgacttcatgcgagacacaatg
gtgaagattaatgatcgctatgagtttcctctgcaactagacctggatagagagaatgga
aaatatctctctcctgatgctgaccgcagtgtgcgaaatttatacacattgcacagtgta
ctggtccacagtggtggggttcatggtggtcattactacgcttttattagacccacgctc
tctgaccagtggttcaaatttgatgatgagcgagttacgaaagaggaactcaagagagct
cttgaggagcaatatggaggggatgaggagcttccacaaacgaatccgtgtttcaataac
acgcccttcaagttcacgaaatattcgaacgcatacatgttggtgtatatcagagaggct
gataaagacaaggttgtttgtaatgtggatgagaaagacattgcagaacacttacagata
aggttgaagaaagagcaggaggagaaggaacggaagaggaaggaaaaggctgaggcccac
ctttacactatcataaaggttgggcgcgatgaagatctccagaaccagattggaaaggac
attcattttgatttggtggatcatgagaaagttcgcagttttcgcatccagaagcaaacg
cctttcacgcagttcaaggaagaaatcgcaaagcagcttggcgtccctgttgagtgccaa
aggttctggctctgggcaaagcgccaaaaccacacatatcgtcctaacagaccactaact
gatcaagaagaggcccaaactgttgggcacttgaaagaagcctccaacaaggctcacaat
gctgagctaaagctcttcttggaagtgcagcgcctccctggtgcagattcagttcccata
cctcctccaatcaaaacaaaagaggacgtgcttttgtttttcaaactgtacaatcctgag
aaggaggaattgcgttatgttggtagatcttatgtaaaggcgagtggtagaccagccgat
atcttggaacggctgaatgagatggctggctttcctccgaatgaggagattcagttgtat
gaggaaattaagttcgaacctaatgtcatgtgcgagcacatcgacaagaaatctaccttc
agggccagccagttggaggatggtgatatcatctgctaccagagagctctaacaagggga
gaagaagatgtttgccggtatcctgacgtcccatcgtttttggagtatgttcgtaaccga
cagaatgtgcacttcagacgtctggagaaaccgaaggatgacgaattttgtttggaattg
tcaaagcaacacacatatgatgatgtggttgagagggtagcagagaaaattggtctggag
gatgcatcaaaaatcaggctaacatcacacaattgctactctcagcaaccaaaaccacaa
cctatcaagtatcgtggcgttgagcggctcagtgatatgctcgtacattataatcagact
tcagatatcctgtattttgagacgttggatttgccacttcctgagcttcagggcctgaaa
accctgaaggtggctttccacaacgctaaaacagaagagctttcagttcacaatattcgg
cttcccaaacagagcacggttggggatgttgtgaacgaactgaaggggaaggttgaactt
tcgagtccaagagcagagcttcgcattcttgaagtattctatcacaaaatttataagatc
tttcctcttaatgagaaaatagagaatatcaatgatcagtactggaccctgcgagctgaa
gaggttcctgacgaggagaaagaactcggtccccaagatcgtttgattcatgtgtaccac
tttacacgggatgcatcacaaaatcatatggttcaaaattttggagaaccattttttctc
gtagttcgtgagagtgagactttggtagaggtgaagggacgcatacagaaaaagctgttg
atttctgatgaggaattttccaagtggaagtttgcctttctttcactgggtcgacctgag
tatcttcaagacggcgatgtagttgcggctcgttttcagaaacgagacacatacggtgca
tgggaacattatttggggctggaacatactgacagtgcacctaagcgatcacacaccaca
aaccagaaccgtcacaatttcgaaaaacctgtaaagatctataactga
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