Physcomitrium patens (spreading earthmoss): 112284716
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Entry
112284716 CDS
T01041
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112284716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112284716
Membrane trafficking [BR:
ppp04131
]
SNARE
SNAP-25[C] (Qc)
STX8
112284716
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Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF4407
Rv1476
Fusion_gly
Sec20
STX6_10_61_N
XhlA
Motif
Other DBs
NCBI-GeneID:
112284716
NCBI-ProteinID:
XP_024380600
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All DBs
Position
7:15368737..15370904
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AA seq
225 aa
AA seq
DB search
MADAWAREFHETALLTEEIDGRIAEKNALPAHSSESIRVVSVSRRKLAVLNNKLDRLESL
LQSDSLKSSLNEKELNRRQNMLVDIRFKFKQMSESLSSTRDNRASLMEGGIAPVETSRTQ
DLDNTGLVKLQRQIMKEQDQDLESLEKTVLSTHHIALAVNEELDLHTRLLDDMDQDADVT
NNKILAAQKRLGYLNKNLGQEWSLLTMIILMVVVVVLVLVLFKLL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgtgggcgagggagtttcacgagaccgctttgttaacggaggagattgac
gggcggattgccgagaagaatgctttgcctgctcactcgagcgagagcattcgggtcgtt
tctgtcagtcggcgtaaactggcggtattgaacaataagctagatcgccttgaatctctt
cttcagagtgactccttgaagtccagcttgaacgagaaggagttgaatcgtcgacaaaat
atgctcgtggatatccgcttcaaattcaagcaaatgtctgagtcgctttcctctacacga
gacaacagggcaagtttgatggaaggtgggattgcgccagtcgagactagtagaacccag
gatttagataacaccggactcgtaaaattacaaagacaaataatgaaagagcaagaccaa
gatttggagagtcttgaaaaaacagttttgagtacccatcacatcgctcttgctgttaac
gaagagctggaccttcacacccgattacttgatgacatggaccaggatgcggatgtaacg
aataacaaaattctggcggcacagaaaagacttgggtacctgaacaagaacttaggtcag
gagtggtcgcttcttaccatgatcattttgatggttgttgtggtggtcttggtcttggtt
ttgttcaaactcttgtag
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