Physcomitrium patens (spreading earthmoss): 112284727
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Entry
112284727 CDS
T01041
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112284727
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112284727
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112284727
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112284727
Peptidases and inhibitors [BR:
ppp01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
112284727
Membrane trafficking [BR:
ppp04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112284727
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112284727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
112284727
NCBI-ProteinID:
XP_024380622
UniProt:
A0A7I4E8G9
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All DBs
Position
7:193526..196676
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AA seq
416 aa
AA seq
DB search
MQRLQELLLRHRFTAADSSSGGEIWVLGICYKVSADANDEAVSAHAFEEFLNDFSSRIWI
TYRKGFESLGESKLTSDVGWGCMLRSGQILLAQALVCHYLGRTWRRNACQECLQEYLQIL
QSFGDSESCSFSIHNLLEAGRPFGLAAGSWLGPYALCRTLEALAKADEDQNAKKGGKRAL
PFAVYVVSGETEGDRGGAPVRCVEDAAVLCSKWGEATEEWSPLVVLVPLVLGLDKLNPRC
LFFYWRSRIFQIEHVIFRLHRCPRVSKLKYLPSLRATFTLPQSLGVAGGKPGASTHLIGV
QGDQAMYLDPHENQQVFAVTPENLELDTSFYHCSVVRRLPLDSIDPSLAIGFYCRDRAEF
DDLCARSSELVKQYNGAPIFTVAEKSAPSKLQNSSDMGLEESFSKDPSSEDDWQML
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtctgcaggagctgctgctgaggcacaggtttacggcagccgactcatcgtca
ggaggtgagatttgggttttaggaatatgttataaagtgtccgctgacgccaacgatgaa
gctgtttcggctcacgcttttgaagaatttctcaatgatttcagttcccgcatctggatc
acatatcgaaaaggttttgaaagtttgggtgagtcaaagttgacaagcgatgtggggtgg
ggatgtatgttacgcagtggtcaaattcttttagctcaggctcttgtttgccactacttg
ggcagaacatggcgacggaacgcttgccaggaatgtttgcaagagtatctgcaaattttg
caaagctttggtgactctgaatcgtgctctttctcgattcataatttgctggaggcgggt
agaccttttggcttggctgctgggtcttggctcggaccttacgctctttgtaggacacta
gaagcgctggcaaaggcagacgaggatcagaatgcaaagaagggtggcaagcgagcatta
ccatttgctgtatatgttgtctctggggaaactgagggtgacagaggtggtgcacccgtt
cggtgtgtggaagatgcagcagtgctgtgctccaagtggggagaggctactgaagaatgg
agccccctggtggtgctcgtgccccttgtccttggccttgacaagttgaaccctagatgt
cttttcttttattggagatctcgtatatttcaaattgaacatgtgatatttaggcttcac
cggtgcccacgtgtttcaaagctcaagtatttgccatcgttgagggcgacgtttacttta
cctcaaagccttggagttgcaggtggtaagccaggagcttctactcacttgataggtgtt
caaggtgatcaggcgatgtacttggacccccatgagaatcagcaggtttttgcagtaaca
cctgagaatttggagctggacaccagcttctatcattgcagtgtcgtgcggcgtctccca
ttggattcgattgatccatctcttgctattggtttctactgtcgggatcgagccgaattc
gatgatctctgtgcgcgttcatcagagttggtcaagcaatacaacggtgcacccattttt
actgttgccgagaagtctgctccttcgaagctacagaacagcagcgacatgggtctggaa
gaatcattttctaaagacccttcatctgaagacgactggcaaatgctttga
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