Physcomitrium patens (spreading earthmoss): 112285012
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Entry
112285012 CDS
T01041
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112285012
03015 mRNA surveillance pathway
112285012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112285012
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112285012
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112285012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CRCB
Motif
Other DBs
NCBI-GeneID:
112285012
NCBI-ProteinID:
XP_024381220
UniProt:
A0A2K1KBR9
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All DBs
Position
7:complement(10140202..10144546)
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AA seq
493 aa
AA seq
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MAESEAVMKVEDTSAASKATEPTPSKKDGDAETENIEELEMKGLKIVENVDDIVDEPGHI
KSEELIEPETIKKVVADDTPYTSAKSFEDLNLSQELLQGLYSEMKFEKPSKIQAATLPMI
VSPPYQNLIAQAHNGSGKTTCFVLGMLSRIDPQLKAPQALCVCPTRELVNQNEEVVTRMG
RYTGITTASTATVETPSHLYSSRREKIVDQLVIGTPGTLKRWITKDKALDTRNIKILVFD
EADQMFDQDGFQDDSLRLWRDINRSGKSCQVLLFSATFSEKVKSFAMKTIPKANYIFVEK
EQLSLDVIRQYQIVCPDSRSKIDVLKNRIFPAAEKLGQSIIFVRTRGAASELHKCLEEDG
HKCTSIQGGLTHEERDRVIKEFRAGETKILIATDVLARGFDQAQVTLVVNYDIPVKNTSN
RHAYAEPDYETYLHRIGRSGRFGRKGAAFNLLVTQEDKRIMRSIEQHFNRNVPEVAWDNE
EGIEHVLKDAGLA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatccgaggccgtgatgaaggtggaagacacctccgcggcgtctaaggcaaca
gagcctacgccatcgaagaaggatggcgatgccgagacggaaaatatcgaggagcttgaa
atgaaaggtcttaaaatcgtggaaaatgtggacgacatcgttgacgagcctgggcacatc
aagagtgaggagcttattgagcccgaaacgatcaagaaggttgttgccgatgatacgccg
tacacctccgcgaagtcgttcgaagacctaaatttgtcgcaggagcttctacagggattg
tattcggaaatgaaattcgaaaaacctagtaagattcaagctgcgacgttgccgatgatt
gtctcgccgccttaccaaaacttgatcgcgcaggctcacaatggttcgggaaagacgact
tgctttgttctcggtatgttgagccgcatcgatccccagctgaaagctcctcaagccctg
tgcgtgtgccccacgcgagagctcgttaatcagaacgaggaggtggtgactcgaatggga
agatacacgggaataacgacggcaagcacagcaacagttgaaacacctagtcacttgtat
tcgtcaaggcgtgagaaaatcgtggatcaacttgttattggtacaccaggaaccttgaag
cgctggataactaaggacaaagctttggacacaaggaatataaagattctggtgtttgac
gaagccgatcaaatgttcgatcaagatggatttcaagatgactcgctgaggctttggaga
gatatcaatagaagtggaaaaagttgccaagtgcttctgttctctgcaaccttcagtgag
aaagtgaagtcctttgcaatgaagaccattcccaaagccaactacatttttgttgagaaa
gagcagctttcacttgacgttatccggcagtaccaaattgtgtgtccagattcccggtca
aagattgatgtcctcaagaaccgcatttttccagctgcagagaaactaggtcaatcaata
attttcgttcgcacccgtggggcagctagtgagctccacaaatgcctggaagaggacggt
cacaagtgcacaagtatacaaggtggtctcacccatgaagaacgtgatcgtgtgatcaag
gaatttcgagcaggagaaaccaagattctgatcgctactgatgtacttgcacgtggcttt
gatcaagcccaggtcaccttggtggtcaactatgatattcctgtgaagaatacttcaaat
agacatgcttatgccgagcctgactatgagacttacttgcatcggattggtcgaagtggg
aggtttggccgcaaaggtgctgctttcaaccttctggttactcaagaagacaaaaggatc
atgcgaagtattgagcagcactttaacagaaacgttcctgaggtggcttgggacaatgag
gaaggtattgagcacgtattgaaggatgcaggccttgcttga
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