Physcomitrium patens (spreading earthmoss): 112285034
Help
Entry
112285034 CDS
T01041
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112285034
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112285034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_14
LRR_EndoS
LRR_At1g61320_AtMIF1
F-box_5
LRR_1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
112285034
NCBI-ProteinID:
XP_024381268
UniProt:
A0A2K1KD44
LinkDB
All DBs
Position
7:17327702..17331513
Genome browser
AA seq
642 aa
AA seq
DB search
MAREKEQRRESPIWMLADENLQDVLARLPDRVDRQSWCLVCKKFLSVEAAGRKYVHLMRP
EILEPVLRRYPQIECLDLSSCVEVTDQCLAAVAKFTSSRLISIKAIRTKGFTIAGFRSLV
ECRFLQDVDVTFCTQVGDAEVIALSELRHLQKLKLDSCRDVTDSGLSSLSRCKGLRILGL
KYCSGLGDFGIQNVAIGCQRLYIIDLSFTEVSDKGLASLALLKHLECLSLISCINVTDKG
LSCLRNGCKSLQKLNVAKCLNVSSQGIIELTGSSVQLQELNLSYCKLISNVLFASFQKLK
TLQVVKLDGCVIGDSNLSLIGSGCIELKELSLSKCQGVTDAGVVGVVTSCTGLQKLDLTC
CRDITDTALKAVATSCTGLLSLRMENCLLVTAEGLIMIGKSCVYLEELDLTDCNLNDNGL
KSIGRCRGLRLLKVGYCMDITYAGLASIGATCTNLRELDCYRSVGISDEGVAAIASGCKR
LKVVNLSYCSSITDASLHSLALLSDLVQLELRACSQITSAGISYIGASCKHLRELDVKRC
KFVGDHGVLALSRGCRNLRQVNLSYTAVTDAGMMAIANMSCIQDMKLVHVNVTSSCFARA
LLACGSLKKVKLLTGLRIALPSGVIRQLENRGTRLRWMEKAP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaaaaagagcagcgacgcgagtcgccaatttggatgcttgccgatgagaat
ttgcaagacgtgctggctcggctcccggatcgcgtggatcgtcagtcgtggtgcctggtg
tgcaagaaatttctatctgtggaagccgcgggtaggaagtatgtgcatttgatgcgtcct
gagattttagaacccgtattgcgacgataccctcaaattgagtgtctggacttgtcgtcg
tgcgtggaggttacggatcagtgcctggcggccgtcgccaagttcacaagctcccggctc
atttccatcaaggccattagaacgaaggggttcactattgccgggtttagaagcctcgta
gaatgccgttttctgcaagatgtggatgtgacgttttgtacccaagttggagatgcggag
gtgattgccctcagcgagctcaggcatctgcagaagctaaagttggattcttgcagggat
gttacagactctggattatcatcgttgagtagatgcaaagggcttagaattttggggtta
aagtattgttcaggacttggagatttcggcatccagaatgttgctatcggttgccagcgg
ctttacattattgacctttcattcactgaggtttcagacaaagggctagcgtcccttgcc
cttttgaagcatctcgaatgtctctctttaatatcatgcatcaatgtgactgacaagggc
ctaagttgtctcaggaatggatgcaaatcgttacagaagttgaacgtggcgaaatgcctg
aatgtgagtagccagggaattattgaattgacgggtagctcagtgcaacttcaggagctc
aatctatcctactgcaagctgataagcaacgtgctgttcgctagttttcagaaactgaag
acactgcaggtggtcaagctggatggttgtgttataggtgattccaatttgagtttaatt
ggcagtggatgtatagagttgaaagagttaagtttgagcaagtgccagggtgtgactgac
gccggcgttgtaggcgttgtgacctcctgcactggcctgcaaaagctagatcttacgtgt
tgccgggacatcacggatacagctttgaaagctgttgcaacaagttgcaccggcctgttg
agtttgagaatggaaaattgtcttttagtgacagccgagggtttgattatgattgggaaa
agttgtgtttatctggaggagcttgacctgacagactgcaatttgaatgacaatggtttg
aagtcgattggtagatgcagaggattgaggctcttgaaagttgggtattgtatggacatc
acatatgctggacttgccagcattggtgccacttgcacgaatctccgggaattggattgt
tacaggtcagtggggatcagcgatgaaggagttgcagcaattgccagcggctgcaagcgt
ttgaaggtggtgaacttatcttactgttcatccattacagacgcaagcttgcactcactg
gcgctgctaagtgacctcgtgcagctcgaattacgtgcttgtagccagataacctcggca
ggaatctcctacattggtgcatcctgcaagcacctccgggagttggacgtcaaacgctgc
aaatttgtgggcgatcatggcgtgttggctctttcacgaggatgtcgaaacctgcggcag
gtcaacctatcatacaccgccgtgaccgatgctggcatgatggcaattgcaaatatgtcg
tgcatccaggacatgaaactagttcatgtgaacgtgacaagtagctgcttcgctagagct
ctcttggcatgtggcagcctgaagaaggtgaagctgctcactgggttgcgtattgcgtta
ccttctggggtgatcaggcaacttgagaatcgtggaaccaggttgcgctggatggagaag
gctccttaa
DBGET
integrated database retrieval system
