Physcomitrium patens (spreading earthmoss): 112285037
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Entry
112285037 CDS
T01041
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112285037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112285037
03036 Chromosome and associated proteins [BR:
ppp03036
]
112285037
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112285037
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112285037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
112285037
NCBI-ProteinID:
XP_024381270
UniProt:
A0A2K1KA81
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Position
7:2290058..2299356
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AA seq
1222 aa
AA seq
DB search
MEDQGVALQVETAGQAVLAALNWNSSPEARQQALAYLESLKAGEVHVLATVAFALVTPDQ
SSEVRLVGLKLLQHMVRMRWENLNADERRQMAAMAAKLLEESAKPNEPWVLKSQVAALMA
EIARREGPSLWNDILPALYTLGSSSALHAELVATFFRWLPEDVTIHNEDLDGERRSQLLQ
GLSQTLPETLPFLYKMLDHHFGAAMAAAKQNQIVSVTQHASAVTAALNAVVPYAEWAPVV
SLANYGLVQACGFLLSAAEFRLSACEVFKLLAGRRRPLDESVGNYNVAMEGVFDTLCNVS
KAYFSELSKRAASGEGEDEDVDQFGECLCEAMVAFGLQNLHCVARNSPKVTDYLNQMLCF
LQHPKLALHSLALPLWTTLLRESSLAMSTTDQQGLTEKEKEKRSHAVHISPDFCAVLLDV
AFQRLLIKDGGDTSAEDESGIQEFSSANDFRQFRSRLVELVRHVAAQQPRLATSKAAERL
QMTISSSNYESVSSKEITALETTQTYLENILNGIQEKTLAAALATTASSNELRTILEDIL
QLLLSVKWNGPALVELHTRHFDAMSPYFKHASAAIPLVVGKFFDLLTSLPVYREYGDTVK
DTMRARLQVCTSFLRLARAGDAAMLPYMQGIAETMTTLHREGRMVRSELNLLGESLLIVG
SAAGGEQQLQVLGWLFGPMQQQWIQPAWQDQYLANPASLVRLFTENSSNDDAHAEMWSIY
HTVNFFERALRRCANPSGKTYSGSSATVHNVDMDGAVTPASSHAMIQHLTWMVSPLLKLL
RCIHALWSPSVASSLPPQVQGALTMAEAEQASLLGELATTRGPAGASSMTDKGVDAGSSI
EHNKVKEIRTWIKGIRDAGYNILGLAAIRLGEGFFVDTDGRPAAMATALLENIEHMELHH
IRQLLHLVVIPVVKVCPANLWDPWLRLLLPPILIHCHRVLSISWTSLIKEGALNIPSNWS
LNTDVSNQSSMQQIQSEVMKEKLLRDLTRETCQLLSTAASPTHNRATQQDASEGDGGSME
VVGTQQLNKMNNLVWFLLQLREAATAALHVGIDALEWPDSESVHKAFVFCAAVTNVATLS
GDSQLQEVVAKDMFSSAIRALMLESNASAQSELVGLLRDIYLQIGSRLSTPRQVLLALPS
ISPDSLSTFETALHKTASAKEQRQLIKSFLLSAGGDQLKAFIPQKNTNVITNVTNPVPRR
FSERSSDHDREEFGNIGLAAII
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcagggggttgcattgcaggtggagacggccgggcaagccgttttggccgcc
ttgaattggaactcctccccggaagccaggcagcaggccctcgcctaccttgaatcgttg
aaagcaggagaagttcatgtgttggctactgttgcgtttgctttggtcacgcctgatcag
tcttctgaagtccgcctcgtcggtttgaagttgctccagcacatggtccggatgcgttgg
gagaatttgaacgctgacgagagacgacaaatggcggcaatggctgcgaagttgttagaa
gaaagtgctaagcctaatgaaccgtgggtcctcaagagccaagttgcggctctcatggct
gagatagctcgaagggagggaccgtcactgtggaatgatattcttcctgcgctttatacc
ctcggcagcagcagtgctcttcatgcagaattggttgctacattttttcgttggctcccc
gaggatgtcaccatccataatgaagatttggatggagagcgccgaagtcaattgctccag
ggtctctctcagacattgccagaaacgttaccatttctttataagatgttagatcatcac
tttggagcagccatggcagctgcgaagcagaatcagatagtgtctgtgacacaacatgcc
tcagccgtgactgcagcattaaatgctgtagttccatatgcggagtgggctcctgtggtt
tcactcgctaactatggccttgttcaagcatgcggcttcttactgagtgctgcggaattc
cgcctaagtgcttgcgaggtattcaagcttctggctggaaggcgtagaccacttgatgag
tcagtgggaaattacaatgttgctatggagggtgtttttgacactctttgcaatgtatca
aaagcctatttctctgagcttagtaaacgtgcagcatctggtgagggtgaggacgaagat
gttgatcaattcggtgaatgtctgtgtgaagcgatggtggcttttggcttgcagaatctt
cactgcgttgctcgaaatagtcctaaagtgactgactatcttaaccagatgctttgtttc
cttcaacaccctaagcttgctttacattctcttgccttacccttatggacgactttgcta
cgggaatcgtccctagccatgagtaccacagatcaacaaggacttactgaaaaagaaaag
gaaaaacgaagtcatgcagttcatatctctcccgacttttgtgctgtgctcttagatgtt
gcattccaacgcctgttgattaaagatggtggagatacctctgctgaggatgagagtggg
atccaagaattttcaagtgccaatgacttcaggcagttccggagtcgacttgttgagctc
gttcgtcatgttgcagctcaacaaccacgtctagcaacctccaaagctgccgagcgcctc
cagatgactattagtagttcaaattacgaatcagtctctagtaaggaaattacggccctt
gaaactactcaaacgtaccttgagaatattctgaacggaattcaagagaagacattggcc
gctgccttggcaaccactgcatcctcaaacgaacttagaaccattctggaggatattctg
caactactgttgtcagtgaaatggaatggacctgcattagttgagcttcatacgcgtcat
ttcgatgccatgagcccttactttaagcatgcctcagctgccattccccttgtggtgggg
aagtttttcgatctcttgacatctttgcctgtgtatagggaatatggagacactgtgaaa
gatactatgagagctcgactgcaggtgtgtacttctttcctgcgattagcgagggcagga
gatgcagccatgttgccatacatgcagggcatagctgagacaatgaccacattgcaccga
gaagggcgtatggttcgatcagagctgaatcttttaggcgagtcattattgattgttgga
tcagccgcagggggtgagcagcagttacaggtcttaggctggttatttgggcctatgcag
cagcaatggatccaacctgcctggcaagatcagtacttggcaaaccctgcgagtcttgtt
cggctttttactgaaaattcgagcaatgatgatgcgcatgcggaaatgtggtcaatttat
cacacagtaaatttttttgagcgagctcttcggaggtgtgccaacccatctggaaagacc
tacagtggttcatcagctactgttcacaatgttgacatggatggtgccgttacgcctgcc
tctagtcatgcgatgatccagcatttgacatggatggtgtcacctcttttgaagctgctg
aggtgcattcatgcattgtggtccccatcagtggcatcaagcttacctccacaagtgcaa
ggagctttaactatggctgaagctgagcaagcctctctccttggggagttagcgacaact
cggggacctgctggagcctcttcaatgaccgacaaaggggttgatgctggaagcagcatt
gaacacaacaaagtgaaagaaattaggacgtggataaaaggcatacgtgatgctgggtac
aacattttggggcttgctgcaatccgacttggagaaggattttttgtggacaccgatggt
cggcctgcagctatggcaactgcgttacttgagaatatcgaacatatggaacttcaccac
attcgtcagctccttcatctggttgtgattccagtggtgaaagtatgcccagctaatctt
tgggatccgtggttgaggttgctcttgcctccaattctcatccattgccatcgtgtgctg
tcaatatcttggacaagcctaatcaaagaaggggcattgaatatccctagcaattggtct
ttgaacacggatgttagtaatcaaagctctatgcagcaaatacaatcagaggtgatgaaa
gagaagcttctaagggatttgacgagagagacttgtcaactgctctcaactgcagcttcg
ccaacacacaaccgtgcgactcaacaggatgcatccgaaggggatggcggaagcatggag
gtcgtagggacgcagcagttgaacaaaatgaataacttagtttggtttctactgcagctc
agggaagccgcaacagccgctcttcatgtggggatcgatgctttggagtggccagacagt
gagtctgttcacaaggcttttgttttctgtgcagccgttacaaatgtggcaaccctgtcc
ggcgattctcagttgcaggaggtggttgcaaaggacatgttcagttctgctattcgtgcg
ctcatgttggagagcaacgcatccgctcagtctgaacttgtagggcttctccgcgatatc
tacttgcaaattggctctcggctctcaacacctcgtcaggtgcttttggctctcccttcg
atctcaccagacagcttgtctacctttgaaactgcgttgcataaaactgcaagtgccaag
gagcagcgccagcttatcaagtcatttctactctctgctggaggagaccagctgaaggca
ttcatccctcagaaaaatactaacgtcataaccaacgttacaaatcctgttccaagacgt
ttttctgagcggtcttccgatcatgaccgggaagaatttggcaacatcggtttggcagct
atcatctga
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integrated database retrieval system
