Physcomitrium patens (spreading earthmoss): 112285300
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Entry
112285300 CDS
T01041
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03440
Homologous recombination
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112285300
03460 Fanconi anemia pathway
112285300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112285300
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112285300
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112285300
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Topoisomerases
112285300
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
112285300
FA (Fanconi anemia) pathway
112285300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
112285300
NCBI-ProteinID:
XP_024381752
UniProt:
A9U3N3
LinkDB
All DBs
Position
8:15590697..15597571
Genome browser
AA seq
869 aa
AA seq
DB search
MAPSVLMVAEKPSIALSIANFLSHGRMSSRRSYLEVHEFDGSFRGTSVRFKVTSVIGHVL
SIDFPPKYQSWDTTDPFELFEAPTIKNESNPKAHVCKHLQQEARGCDYLVLWLDCDREGE
NICFEVMESAVPVLRKLPGQQVFRAKFSAISEKDVRVAMNTLGEPNKDESLSVDARQEID
LKVGVAFTRFQTRYFQGKYGNLDSSVISYGPCQTPTLGFCVERHLRITTFVPQPFWVVRP
HLSKGGHQLMLEWDRNRLFDREVAMLFQKLVLDAKSVRVADVVKKEDRKTRPHGLNTVDM
LKVASSALNMGPHHTMQIAERLYTQGYLSYPRTESTAYPASYDIREALSIHRNHPIWGDY
ASSLMSLGPHPPKSGVDVGDHPPITPTRSATESELGGGDSWRLYEYVTRHFLGSVSPDCK
YTRTKITFTAGGEKFFASGRTVTSAGFTAVMPWLAVSDESLPLISAGELIPMTDVELYQG
RTSAPDYLTESELITLMEKHGIGTDASISVHINNICERNYAQVQSGRRLVPTPLGITLVR
GYQVIDVDLCLPDIRAFIEKQITLIAKGQAEYSRVVRHVLQEFAAKFAYFVAQIEIMDTL
FEAQFSPLADSGKPLSKCGKCLRYMKYIAMRPSRLYCPSCEEVHALPQNGHIKLYKEITC
PLDNFELVLFSLAGPDGKSYPLCPYCYNNPPFEGAEKLFGGVGFSKEPGKHVGKGGMPCT
LCPHPTCRNSMIQQGVCACPECDGTLVLDPVSAPKWRLDCNKCSNLVYLPHNAHKIAVCQ
ERCEECGSALLEVNFNKNSTPLSNGATLHKACLLCDELLYSLVEVKHGRSFFSRSGRGRG
RGRGRGRGRRGRGRSRGRGEDPRMSFRDF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcggtgcttatggtggcggagaagcccagtattgctctgtcgatcgctaat
tttctttcacatggccggatgtcaagtaggcgatcttacttggaggttcatgagtttgat
gggagtttcagaggaacatctgtccgctttaaggttacgtcagtgattggtcacgttctc
agcatagattttcctccaaagtaccagagttgggataccactgacccttttgagctgttt
gaggcaccaacaataaaaaatgagtccaatcctaaggctcatgtgtgcaaacatctgcaa
caagaggcacgtggttgtgattacctcgtgctatggcttgattgtgaccgggaaggagaa
aatatttgcttcgaagtgatggagagtgctgttccagtgttgagaaagttacctggacag
caagttttccgagccaaattttcagctatcagtgagaaggacgttcgagttgcaatgaac
acccttggcgaacccaataaagatgagtctttatcagtggacgcgcgtcaggaaatagac
ctgaaagttggtgtagcatttacacgctttcagactcgctactttcaagggaaatacggc
aaccttgactctagtgttatctcgtatggtccttgtcaaaccccgacactcggattctgt
gtggaacgccacctccgcatcacaaccttcgttccccagcctttttgggttgtgagacct
cacctaagcaaaggaggacatcaattgatgctggaatgggatcgtaaccgcctttttgat
cgtgaggttgcaatgctctttcagaaactggtgttggatgctaaatcagtgcgcgtggcc
gacgtcgtaaagaaagaggatcgaaagacccgtccacatggccttaatactgtagacatg
ctcaaggtggcatcgagtgcacttaatatgggaccacatcataccatgcaaattgctgag
cgcctttatacacaaggttatttgagttatcctcgaacagagagcacagcatatccagcc
agctatgatatccgtgaggctctttctatacatagaaatcatccgatttggggagactat
gcttcctcgttgatgtccttgggccctcatcctcctaagtctggagttgatgtaggtgac
catcctcccatcacccccactagatcagcgacagagtcagagttaggaggaggggactcg
tggagattgtatgagtatgttacgcggcattttctcggtagtgtgagccctgattgcaaa
tacacaagaacgaagatcacttttactgctggaggtgagaagttctttgcaagcgggcga
acagtaacctcggcggggttcactgctgtgatgccatggcttgctgtttcagatgaaagt
ttgccgcttatttctgctggagaattaattccaatgacggatgtggaactttaccagggg
cgaacttcagctccagattatttaactgaaagtgaactcataactctaatggaaaagcat
ggcataggcactgatgcgtccatttcagtgcacatcaataacatctgtgagcgtaattat
gcacaggtacaatcaggtagacgattggtgccaacaccattgggtatcacgcttgtacgc
ggataccaagtaattgatgtggatctttgcctccctgatattcgtgctttcattgagaaa
caaataacactcatcgctaaggggcaggcagagtactctcgggtggtacggcatgtcttg
caagagtttgctgctaagtttgcctacttcgttgctcagatagagataatggacacactt
tttgaggcccagttttctcctttggccgactctggaaagccgttgagcaaatgcggaaag
tgtttgcgttacatgaagtacattgctatgcgaccatcacggctttattgtccctcatgt
gaagaagtgcatgccctcccccagaatggccacatcaagctgtacaaggagatcacttgc
cctcttgacaacttcgagctggtgctcttctccctcgcgggtcctgatggaaaatcatat
cccctttgtccttattgttacaataatcctcccttcgagggagcagaaaaactttttggt
ggagtaggattctctaaggaaccagggaaacatgttgggaagggtggaatgccttgcaca
ttatgtcctcatcccacttgtcgaaattcaatgattcaacaaggagtatgtgcatgtcct
gaatgcgacggcaccctagttcttgatcctgtgagtgcccccaaatggaggcttgactgc
aacaaatgcagcaatcttgtctatcttccgcacaatgcacataaaattgcagtttgtcaa
gaacggtgcgaagagtgtggttctgcgctattggaggtcaatttcaataaaaattcaacc
cccctgtcaaatggagccactctacacaaagcatgccttctttgtgacgaactgctatat
tcacttgtagaggtaaagcatggtagatcatttttcagtaggtctgggagagggagaggg
aggggtaggggtagagggcggggtcgccgtggtcgcggtcgtagtagggggagaggggaa
gaccctcggatgagcttcagagatttctaa
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