Physcomitrium patens (spreading earthmoss): 112285334
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Entry
112285334 CDS
T01041
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112285334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112285334
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112285334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_DCAF4
NBCH_WD40
KNTC1_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
112285334
NCBI-ProteinID:
XP_024381816
UniProt:
A0A2K1K6V1
LinkDB
All DBs
Position
8:complement(7473366..7477909)
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AA seq
523 aa
AA seq
DB search
MERGRKDYVPVRPKAYPASKNALTVDAKYWKAFKILSTPQHIGAVTSIQFSPVDHYDFAV
SSSTRVTIYDGVTGEVKKTISRFTDVAYSGTFRSDGQLLAAGGETGIVQVFDLGSRQILR
QLKGHKGAVHWVRYAPQDKLHIFSAGDDRTVRWWDVSTSESLSTLEGHTDYVRCGVACPT
TNDLWATGSYDHSVRLWDIRTPKCVLQLEHGKPLEDVVFFPSGGLLASAGGTEVKVWDIV
GGGREVQTLGNHQKTVTSLTIMCPRESTSALEPDAPRLLTSSLDGHVRVFDTSQFKVTHA
AKYPHPLLSMGLSASSQTLAVGTASGMLFVRQKKEPKSEEDIEKPQNVLDTTTPKKAKQL
RPNNFRYFLRGRSEQASEGDHVLARPQRQRLTAQDKFLRKFMYREALSSALATSDSTVIV
AVMEELIARRGLVKAISNRDAPALEPLLAFLCKYIVMPRQARLLIPVAHLVLDTYSESLG
LSPTITHLVCVLKDRVQSEVKLHMALQSLQGIMEPLIQASSQI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggggaggaaggattacgtgcccgttcgaccgaaggcgtaccctgcgtccaaa
aatgcgctcacagtagatgccaagtattggaaagcattcaagattctaagcacgcctcag
cacattggcgctgtcacatcaatccagttctctcctgtcgatcactacgattttgctgtc
tcgtcctcgactagagttactatctacgatggagtcacgggagaagtgaagaagactatt
tcacggttcactgacgtggcttactcaggaactttccggtccgatggtcagctccttgca
gccggtggtgaaacaggaattgtacaggtatttgatcttggcagccgccaaattttgcgt
cagctaaaaggacataaaggagcggtccactgggtccgatatgctcctcaggataagcta
cacattttttcggcaggtgacgaccgtaccgtgcggtggtgggatgtgtccacttcggaa
tccttgtcaactttggagggtcacactgattatgttcgttgtggtgttgcatgccctaca
acgaacgacctttgggccactggatcttatgatcattcagtacgtctttgggacattcgc
actcctaaatgcgtcttgcagctggagcacgggaagccactggaagatgtagttttcttc
ccatcaggaggtctacttgcctctgcggggggtactgaagtaaaggtatgggatatagta
ggtggaggaagggaagtccaaacgctggggaatcaccagaaaactgtgacatctctcact
attatgtgtcctcgtgagtccacttctgctctagaaccagacgccccaagactgttgaca
tcttctctggatggccatgttagagtctttgatacaagtcaatttaaggtgacacatgct
gccaagtatccacacccactcttgagcatgggtttgtcggcatcatcccaaaccctagca
gtagggacagcttcaggaatgcttttcgtacgtcagaaaaaagaaccgaaatccgaggag
gatattgagaagccacaaaatgtattggatactacaacgcccaagaaagccaagcaacta
cgtccaaataattttcgctactttttgcgaggtcgctcagaacaagcatcggaaggtgat
catgtactagctcgacctcaaagacaacgtcttacggcgcaagacaagtttctacgaaag
ttcatgtacagagaagcgctctcttctgcgctggcaacatcagattccacggttatcgta
gctgtgatggaagagttaatagctcgacgtggactggtgaaggccatttcaaatcgtgat
gctcccgctctcgaacctctgctcgcatttctatgcaaatatattgtgatgccaagacag
gcgagacttctaattccagttgcccatctagttcttgacacctactctgaatctctcgga
ctttcaccgacgataacacatcttgtatgcgtgctgaaggatcgagttcaatctgaagtg
aagcttcacatggctttacagtccttgcaaggaattatggagcctcttattcaagcgtct
tcgcaaatttag
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