Physcomitrium patens (spreading earthmoss): 112285335
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Entry
112285335 CDS
T01041
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112285335
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
112285335
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
ANAPC4_WD40
eIF2A
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Mala_s_1-like
HTH_69
Motif
Other DBs
NCBI-GeneID:
112285335
NCBI-ProteinID:
XP_024381817
UniProt:
A9RYA1
LinkDB
All DBs
Position
8:complement(2019364..2025404)
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AA seq
1335 aa
AA seq
DB search
MRNLVVINEVHGVVEGDDDSKLQIAAAAVDVDNGLFFVVSQSSALLCYSLSSSKVEWIVT
LDEEGGPVVAMDWRVEVESVVIGRSSGQVVEVSDSGQEVQEVGSLKGGLLAMAASPDGEL
LLLATGFGQLLVMTQDWDLLYEVTLDEGLAASGSVQLSWRGDGKYFATLVTGSGASTDSS
PLKIWERDTGALYASGESIPYLQTAMSWCPSGARIGTACIQPNSTSQPLIMSFEKNGLKR
DKFQLEGPLDTHVNYLKWNSNSELLAMVITTKDWTGVQIWSCSNFHWYLKQELRFPSTDE
LNVLWDPEDPMTLVCWTASGTIRTLKLGWKSAVLDSSIALVINGLSLLVSPLSLALIPPP
MSLFTITFQAPVQVVAFLQDHERCCFIAARLSDSTLSVVTLPELNDWLDLDGINHTAHSI
SVLSDLKQSISELRHLTWLSSGALLGALSVQPGSDKVGISGNFSGTQNGVFFQTYPGSKE
ILVEVDLDMVAYNPSPIMSDGVQIQGVQETPVKQAVISIIKNKAPLSDQNGDAFVQLGDG
SMLLYSESQGASQFGKTVIGKFARPCPWTSVLQSENGETLLLGLDQKGSLELLGRCVLCR
DCSSFVVHTAADSRSHLLYTTQRDSMHVVSLSDLSSLSEVQSKQEVNMKPEISDGRKPKG
VGFQEENLKVRPLWERGARLVTALGGHDVAVIVQTIRGNLETVYPRGLVLGAIAEALKKG
DFREAMGLTRRHHINLNVLVDYGGWRNFCVKASEFVKQVGKLNHITELVYALNEENIVET
TYKNLLPPFPEPLSPADAATELMKSQFTANKVQTVLKSLRLGVEKEIPVSPGKELCILAT
LAKSRPPELKEALQRIKSLREAELQGEVAVELEAVEETGEKGKVILSAEAALKHLLWLSD
ADIVFKEALGLYDLHLAAMVASHAQRDPKEFIPLLKELEEMPPHLMQYSIDVRLGHYESA
LQNLAQGGEANFNECLQLMMDHAELFPLGLHIFRESKNRLPVLEAWGDHLMQQEKFEDAA
AAYCSCNNLQKALGSYRAGGLWRGVMTIAGRMNLSREEWTSLASDLGEELQAMGMPAEAA
CVALEYIHDVDSGVRLLLEAREWMEAVRVSSLYAREDLLSSLIESAALECASALIEEFTE
GLDKVRKYLLRYQTVRQRRLALAAKLKAEEDGEWVDDDTISEASSHLSSMSAYSHGTAAT
SSVTTGSGRGRKQSVRSQKKVKGGRIRAGSAGEEGGLVDYIRGMAVSPRMLDEVRRLLSV
LVLQGHYSVAHHVQSSLVAYQNDQKVALETMEKDAADDNLQAGNPPSASTAAVSKSSSPA
IWRLAVLEPPDGVCI
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatttggtggtgatcaatgaggtgcatggggtggtggagggtgacgatgactcc
aagctgcaaatcgcagctgcggctgttgatgttgacaatgggctcttctttgtcgtttcg
caatcttccgcactcttatgctactctctttcttcctccaaggttgaatggattgtcacc
ttggacgaggagggtggacctgtggtagctatggactggagggtggaggtcgaatccgtt
gttattggccgttccagcggacaggttgttgaggttagtgattctggtcaagaagtgcaa
gaggtgggttccttaaagggaggacttctggctatggcagctagtccggatggtgagctc
ttgcttctcgctactgggtttggtcaactcctggttatgactcaagactgggatcttctg
tatgaagtcactcttgacgagggcctcgctgcttcaggtagcgtgcagctaagctggcga
ggggatggcaaatattttgccacacttgtgacagggagcggtgcctccactgattcgagt
ccgttgaagatctgggaaagagacaccggagccttgtacgcatctggagagagcattccc
tatttgcaaacagcgatgtcttggtgtccctcaggggctcgcattggcactgcgtgtata
caaccgaacagcacaagccaacccctcataatgtctttcgagaagaacggtctcaagcgc
gacaaatttcagctggaaggtcctctggacacgcatgtaaattatctcaagtggaacagc
aattctgagcttctggctatggtgattactactaaagattggactggcgtccagatctgg
agctgcagcaatttccactggtacttgaaacaggagctacggtttccaagcacagatgaa
ctgaacgtgttgtgggatcctgaggatccaatgacactagtctgctggacagccagtggg
accatccgcactcttaaacttggatggaaatctgcagttctagactcgagcattgctctg
gttattaatggccttagcttactcgtgtcacccctttctcttgccctcatccctccgcct
atgtcactctttacaattactttccaggccccggtacaggttgtggcatttttgcaagac
catgaacgctgctgtttcatagctgcacggctctcggatagcacgctgagtgttgtgact
ttacctgagctcaatgattggttagatcttgatggaatcaatcacacagcgcattctatc
tctgttctctccgacttgaaacagagcataagcgagctccggcaccttacgtggttaagt
tctggggcgctactgggcgccctctcagttcaaccggggtctgacaaggttggcatttcc
ggaaacttctcaggaactcaaaatggggtgtttttccaaacttatccaggaagtaaggag
atactcgtcgaagttgatcttgacatggtagcctacaatcctagtccaattatgtcagac
ggtgttcaaatacagggagtacaggaaacacctgtaaaacaggcggtgattagtatcatc
aagaacaaggctcctctgtcggatcagaacggagacgcttttgtccaactaggggatggc
tcgatgttgttgtattctgaatcacaaggggcgtcgcagttcggtaaaactgtgattggg
aagtttgcgaggccttgtccatggacgagtgtgctgcaatctgagaatggagaaactctt
ctccttggactcgatcagaaggggagtttggagcttctgggtcgctgtgttctctgcaga
gattgctcaagctttgttgttcatacagcagctgattctcgatctcatcttttgtacacc
acgcagagagactcaatgcatgttgtcagtttgtctgacctctcgtccctctcggaggtg
cagtctaagcaggaagttaacatgaaacctgaaatttcagatgggaggaagccaaaaggg
gttggtttccaagaagagaatctgaaagtgcgtcccctgtgggaacgaggggcgaggttg
gttacagcgttaggaggtcatgacgtggctgtgatagtgcagaccataaggggtaatttg
gagacagtatatccacggggtcttgtgctaggtgcaatcgcagaagccttgaagaaaggc
gattttcgtgaggctatgggattaactcggaggcatcatattaatctgaatgtattagtt
gattatggaggttggcgaaacttttgcgtgaaagcttctgagtttgtcaaacaggtgggt
aagttaaaccacatcactgaactagtgtacgctctaaatgaggaaaacatcgtcgaaacc
acgtacaaaaacttactacctcccttcccagaaccactaagccctgcggatgctgcaact
gaattgatgaagtctcaattcacagccaacaaggtgcagactgttctgaaatctttgaga
ttaggtgtagaaaaagagattcctgttagtcctggaaaagagctttgcatcctggccacg
ctagctaagagccgcccaccagaattgaaagaagctttgcaacgaatcaaaagtttgcgt
gaagcagagctgcagggagaagttgctgtagagctggaggcagtcgaagagacgggagaa
aaggggaaggtcatactgagtgctgaggctgcattgaagcatttgctttggctatcagac
gcagatattgtctttaaagaagctctaggattgtacgacttgcacctggcggcaatggtt
gcttctcatgcgcaaagagatccaaaagaattcattcctcttttgaaagagttagaggaa
atgccaccacacttaatgcaatacagcattgacgtaaggttgggtcattatgagagcgct
ctgcaaaaccttgctcaaggaggggaagccaacttcaatgaatgcctacagttgatgatg
gatcatgctgagctatttccacttggattacatatttttagagaatctaaaaataggctt
cctgttttggaagcatggggagatcatctaatgcaacaagaaaagtttgaggatgctgcg
gctgcttactgctcttgtaacaatcttcaaaaggctctgggttcatatagagctggtggc
ttatggcgaggagtgatgactatcgcaggccggatgaacctttctcgtgaggaatggacc
tcacttgcaagtgatttgggagaagagctgcaggctatgggcatgccagctgaagctgct
tgcgttgccttagagtatatccatgatgtagattctggggttagattattgctagaggcc
agggagtggatggaagctgtcagagtatcttcgttatatgctcgtgaagatcttttatcc
tcactcattgaatcagccgctttggagtgtgcaagtgccctgattgaagagtttacagaa
ggtcttgacaaggtgaggaagtatcttttgcgttatcagaccgtcaggcagcggcggctg
gcgttagcagcaaagttgaaagcagaggaagatggagaatgggtggatgatgatacaatt
tcagaagcaagcagccaccttagtagtatgagtgcatactcccatgggacggctgctaca
agcagtgtcactacagggtcagggcgaggaagaaagcaaagtgttcgatcccagaaaaag
gtcaaagggggccgaattcgagctggcagtgctggagaggaaggaggtcttgttgactac
atcagaggcatggcagtaagtcctcggatgctagatgaagtacggaggttgctgagtgtg
ctcgttcttcaagggcattattctgttgcacatcatgttcaatcgtcattagtcgcatac
caaaatgatcagaaggtagcgttagagacaatggaaaaggatgccgcagatgacaatttg
caagcggggaatccaccgtctgcaagtactgcagcagtgagcaaatcctcgtccccagca
atatggagattggcggtgttggagcctccagatggcgtttgtatataa
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