Physcomitrium patens (spreading earthmoss): 112285495
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Entry
112285495 CDS
T01041
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112285495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112285495
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
112285495
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
112285495
DNA repair and recombination proteins [BR:
ppp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112285495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
AT_hook
Fpg-like_C
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-GeneID:
112285495
NCBI-ProteinID:
XP_024382143
UniProt:
A0A2K1K8K5
LinkDB
All DBs
Position
8:16902321..16907143
Genome browser
AA seq
506 aa
AA seq
DB search
MPELPEVEAAKRLLDSHCLGATIVKAVVDNDTKVIDGVTPAALQESLTGKKILSTHRKGK
HLWLKLDSPPWPSFQFGMSGAVIIKGVKGPQYRSSKVGDEEEAFPTTYSKVHLVLSTGVE
LAFTDKRRFARVRLLEDPSKVPPISELGFDAYLELPSAEQLIEAMKTKKGSVKALLLDQS
FIAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDADSEQFPRS
WLYHHRWDKKPGMIDGNQIETISISGRSSAFVANVQKYTGPELKGARTRQAVEEEIPHDD
SVAEPIAGGGNVEEAADATEEEATEEKVGVTETPKRGRGRPPKNKNDSPAKSPATESPAA
PGSKKRGRPPKLKTSSAASEGEETGKESPSEPKRRGRPPKTKTDGSKESVSKASEEDDSE
KKDLSSPITPKRRGRPPKSKPEAAEEVEVAKKGKTEEGGATPKRRGRPPKAKAESEAEDG
SGDAETAATTPTPKKRGRPPKAKSAS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccggaggtggaggcagccaaaaggctgctggatagccactgtcttggg
gctacgattgtgaaggccgttgtggacaacgacaccaaagttatcgatggagtgacaccg
gccgcgctccaggaaagcctgacaggaaaaaagattttaagcacccaccggaagggcaag
cacctgtggctgaaactcgattctcccccgtggccctccttccagttcggcatgagcggc
gcggtcattatcaagggcgttaagggtccacagtacaggagctcaaaggtgggcgacgaa
gaagaagcatttccgacgacttactcaaaagtgcacttggtgctgagcactggagtagaa
ttggcatttactgataaacgtcgctttgcccgtgtgcgccttcttgaagatccttcgaag
gtgcccccaatatccgaactgggattcgatgcctatcttgagcttccatctgcggaacag
ctgatcgaagcaatgaagaccaagaaaggatccgtcaaagctcttcttcttgatcagagt
ttcatagcaggcataggaaattgggtgggagatgaagtattatatcatgcgaaaattcac
cctgagcagtctgctagttcgttaaaggaggaggaagtcaccagattacacgcatccgta
agggaggttttggaaaaggcgatttccgtggatgcagatagcgagcaatttccacgcagt
tggctataccaccatcgttgggataagaagcctggaatgattgatggaaaccagattgag
actataagcattagcggaaggtcgtcagcattcgttgccaatgtacagaagtatactgga
cccgagttgaaaggtgccaggacgagacaagctgttgaagaggagataccacatgatgac
agcgtggcagaacctattgccggtggtgggaatgtggaggaggctgccgatgcaaccgag
gaagaggcaactgaagagaaagtaggcgtcaccgaaacacctaaacgtggcaggggtcga
cctccgaaaaacaaaaatgacagcccagcgaagagccctgcaaccgaaagtcctgcggct
cctggctcgaagaagcggggcagacctccaaagctgaaaacctcctctgctgccagtgaa
ggagaagagaccgggaaggaaagtcctagtgaacccaaacgaagaggccggcctccaaag
acaaagactgatggttccaaggaatcggttagcaaggcttccgaagaggatgattctgag
aagaaggatctatccagtcctattactcctaaacggaggggtaggcccccaaagtctaag
cctgaagctgcagaagaggtggaggttgcgaagaagggtaagacggaggaaggtggtgcc
acaccaaagcgccgaggtcgtcctcccaaggccaaagctgaatctgaagctgaggatggc
tcaggagacgccgaaaccgccgctactacgccgacgccgaagaagagaggtcgtccaccc
aaagcgaagtctgctagctga
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