Physcomitrium patens (spreading earthmoss): 112285607
Help
Entry
112285607 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112285607
03015 mRNA surveillance pathway
112285607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112285607
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112285607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_ACIN1
RRM_5
RRM_10
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
112285607
NCBI-ProteinID:
XP_024382327
LinkDB
All DBs
Position
8:2095477..2101170
Genome browser
AA seq
404 aa
AA seq
DB search
MAKTVGKPRAASPSVTTGSSSYTGSSSASGSRSRSPSSSSSGSEVSGSRSPPAKTSGVSG
AKKIRSSSPPPKRISPAKKLRTPTPESTVLHVGCLTRNVNETHLREIFGNYGEIVHVELA
MDRTVNLPKGYGYVEFKTRVDAEKALAHMDGGQIDGNIVSAQFILVPRKKASPPLKRGVS
PPPKREIMGRDGPPRDGLKDGSRRRDSPPPRRGRSPSPPPRRRSVSPRRRMADSPPRRRP
ALASPRRRSPSPFRRRRRSPIRSPPRRIRGSPVGRQRSPPPPYRRRSPPPGRRLRSPPPR
RSPPRRRTSRSPPPRRPLRSRSRSRSPPRRARSPVGKRRKSTSYPSSPSPAKKRTSPPRG
AKDFSKSRSPKKTIANSSPSGRSSSSPSPSKSSQALAKSIPANN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacagtaggaaaacctagagcggcatcaccatcagttaccactgggtcatcc
tcttatacgggttcatcatcagcatcaggttcaagatcaaggtcaccgtcgtcttcttct
tctggaagcgaagtctccggaagccggagccctcctgcaaaaaccagtggtgtttcaggt
gcaaaaaaaatcagatcatcctcccctccacccaagagaatttcccctgccaaaaaatta
cgtactccgacacctgagtctactgtgttacatgttggttgtcttactcgaaatgtaaac
gagacacatctaagagagatatttggaaattatggagaaattgtgcatgtggagctggca
atggatcgcactgtgaatctgccgaaagggtacggttatgttgagtttaaaacaagagtc
gatgctgagaaggcattggcgcatatggacgggggccaaattgatggaaacatagtgagt
gcacagtttattttggtgccgaggaaaaaggccagtcctcctttgaaaagaggtgtttca
cctcctcctaagagggagatcatggggcgagacgggcctccacgtgatggtttgaaggat
ggttcacggcgtcgtgattctcctccaccccgtagaggacgatcgccttctcctccccct
cgaaggcgttccgtgtcaccccgaaggagaatggctgactcgccaccccgcagacggccc
gctttagcatctcctcgccgacgctccccatcgccctttcgccgtcgtcgtcgttcacct
attaggtctcctcctaggagaatacgaggtagccctgttggacgacagcgctcaccacca
ccaccgtacagaaggaggtctcctccacccgggaggcgcttaaggtcaccaccaccccgc
agatctccaccaagacgccgtaccagcaggtctccacctccgcgccgaccacttcgttca
cgttcaagatctcgttcacctccgagaagggcacgatctcctgtaggcaagcgtaggaag
tccacctcttacccatcttcaccaagccctgcaaagaagcgcacttccccaccacgtggc
gccaaggatttttcgaaaagccgaagcccaaagaagaccattgcaaatagcagccccagc
ggtcgaagtagtagctctccatcaccgtctaaaagcagccaggctttggcaaaatcaatt
cccgccaacaactaa
DBGET
integrated database retrieval system
