Physcomitrium patens (spreading earthmoss): 112285621
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Entry
112285621 CDS
T01041
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112285621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112285621
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112285621
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112285621
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Sina_TRAF
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
112285621
NCBI-ProteinID:
XP_073392080
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Position
8:883101..885133
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AA seq
294 aa
AA seq
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MVRFAMQALGTESPLQRPSKRSRSEPLLELPTSPPLPLLLQEEDHQLAATFDPDTLDCQI
CMEALHTPIFQCSNGHIACSSCCQKLGNICASCSKPTGRIRCLAIEKLIDSLHMSCRNAE
FGCRKMLKFTKRKGHELFCPCTPFDCPVSDCPFSGAATSFPDHFSESHQIRTLNFQYDVW
FTAVLNPTDLHLLLKADNMVFLLHYEKEDLGNLVFVTLFGAPQREEFFSYHLAVKYGQTR
LTMESVPRSILRADKRSTNFIFIPRPLNIPEGLLQIEISFHHPGEDISGLQISP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgattcgcaatgcaggcacttggaaccgagtccccgcttcagagaccatccaaa
agatcccgcagtgaacctctgctggagcttccaacgtcgccaccattgcctttactactg
caagaggaagaccaccaattggcagccacgttcgaccctgacactctagattgtcagatc
tgtatggaggctctccataccccaatctttcagtgctcaaatggccacattgcctgttcg
agctgctgccagaaactcggcaacatttgcgcatcgtgctccaaaccaactgggagaatc
agatgcttagccatagagaagcttatagattcccttcacatgagttgcaggaatgcagag
tttggttgccggaagatgctgaagttcacaaagaggaaaggccacgagttgttctgccct
tgcactcctttcgactgccctgtctcggattgtcctttctcaggagctgccacatccttt
ccggatcacttctccgagtcccatcagataaggaccctgaacttccaatacgatgtttgg
ttcacagccgttctaaacccgacagaccttcatttgctcttaaaagcagacaacatggtg
tttcttctccactatgaaaaggaagatttgggtaacttagtatttgttaccttatttgga
gctccacaaagagaggagttcttttcgtatcacttggcagtgaaatatggtcagaccagg
ttgacgatggagagcgtgcctcgaagtattctgcgagcggataagcgctcaactaacttt
attttcattcctagacctttgaatatacctgaaggtctgttgcaaatagagatctcattt
catcatcctggtgaagacatctcgggcttgcagatcagcccctag
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