Physcomitrium patens (spreading earthmoss): 112285709
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Entry
112285709 CDS
T01041
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03430
Mismatch repair
ppp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112285709
03460 Fanconi anemia pathway
112285709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112285709
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112285709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112285709
NCBI-ProteinID:
XP_024382495
UniProt:
A0A2K1K8F7
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Position
8:complement(15604179..15610223)
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AA seq
920 aa
AA seq
DB search
MVMGSNGGAKIQPIDRAAVHRICSGQVVLDLATAVKELVENSLDAGATSIEIRLKEYGSV
LIEVADNGSGVSPENYQGLTLKYHTSKISDFSDLQTLTSFGFRGEALSSLCALSDVSVTT
RAKEEAIGARLTYDHSGVLSSQESVARAVGTTVAVANLFSPLPVRFKEFKRNIRREYGRL
LSVLQAYALIAKGVRIFCTNQVGKSGRTTIVRTQGSGSVKDNIISVFGSKTAACLEPLNM
EVSDGCLVEGFISRPGSGCGRASGDRQFIYVNGRPVDLPKINKLLNELYGSFNSLQKPMA
FLNFILTPTAYDVNVTPDKRKVFLHTESALLTALKEALECVYTPDKYTYTVNNFADKATS
SQHGVSIVDFETQPLSPIGQLDPEEDDFENLEEKTATAEESEVVPMRRGGLGGGAVRTSL
GTPTASPVSGRKDGSKNDFIDLANFKLKGARTVASEKGNVITPSDALVNNLKLNRIALKT
SQSRLTGFVSTSKKTSSKKRDAPARMGEDFEMEEEDKMVTFEPSLDGTSAMEVEDITSTK
KIQEKDPCCAGHTEHALTPAAPKLKLVIGLSEKEASSSKVGGDDVDLDKDDNHITGLEDE
GVELSPLNRSIVDKAVAASAQVANQPSGPPVDTSEVLFDIHKLRRKSERGLLHFADTMAP
QGKSIKRMRGFTAATLEAARVTDGGAGKEAALVAATKELERSFNKADFKNMKVVGQFNLG
FVLAKLDQDLFIVDQHASDEKYNFERLTKSTILNKQPLLRPLSLELSAAEEVIVTTHIET
FRQNGFDFVENEDAPLGSRLSLSAVPFSQNITFGIGDVQELVGILANGTAPVAKPSTTNG
TGSQNGSQKGGLLSAIRPSRVRGMLASRACRSSIMIGDALCKKEMEKILCHLADLDAPWN
CPHGRPTMRHLADLEVLRQK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgggcagcaatggaggtgctaaaattcagcccattgatagggcggcagtgcac
cgcatctgttcaggccaggtggtgcttgatttggcaacggcggtgaaggagctcgtggag
aatagtctcgatgctggagctacgagtatcgagattcgcctaaaggagtatgggagtgtg
cttatagaagttgctgacaatggatcaggggtctcaccagagaattatcagggtctcact
ttgaagtaccacacgtccaaaatttctgatttttcagacttgcaaacccttacgtcattt
ggattccgaggagaggctttgagttcgctctgtgcactctcagatgtaagtgtcactaca
cgtgctaaagaggaagctatcggtgcccgtctgacgtatgaccattctggtgtgctctcc
tctcaggagagtgtagcacgagcggttggtaccactgtagcagtcgccaacctcttttcg
cccttgcctgtcaggttcaaggagttcaagcgcaacatacggcgcgagtacggccgtttg
ctgtccgtattacaggcatacgcattgatagccaagggcgttcgaatattttgtaccaat
caggtcgggaaaagtgggcggacgacgattgttcgaacacaaggtagtggctcagtcaaa
gacaacataatttctgtgttcggtagcaagacagctgcatgtttggagccattaaatatg
gaggtctccgatggctgcctcgtggagggattcatctccaggcctggtagtggttgtggc
agggcttcaggtgacagacagtttatttatgtcaacggccgtcctgttgaccttcccaaa
atcaacaagttgttaaacgagctgtatgggtcctttaactctcttcagaaaccgatggca
tttttgaatttcatcctgacacccacagcttacgatgtgaacgtaactcctgacaagcgg
aaggtatttctacacactgagagtgccttgttaactgccctgaaggaggccttggagtgt
gtatatacccctgataagtacacttacactgtcaacaactttgctgataaagctacttct
tcccagcatggagtaagcattgttgattttgagacccagcctctcagtccaattggtcag
ttagatcctgaggaggatgattttgagaatttggaagagaaaactgctactgcagaagaa
agtgaagtcgttcccatgcgtagaggtgggcttggtggaggagcagttcgtaccagtttg
ggaactcccacagcttctccagtttctggacggaaagatggatccaagaacgattttatt
gatttggcgaatttcaaattgaagggggccagaactgtagcaagtgagaaggggaatgtt
attacgccttccgacgctcttgtgaataatttaaagttgaataggatcgctctcaagaca
tcgcagtctcgtctaacaggttttgtttcgacaagcaaaaagacttcttctaaaaaaagg
gatgcgcctgcacgtatgggggaggattttgaaatggaggaagaggacaagatggtaact
tttgaaccgagcctagacggaacttctgcaatggaagttgaagatatcacttctacaaag
aaaattcaagaaaaagacccctgttgtgcaggtcacactgagcatgctctaacgccagct
gctccaaagcttaaacttgtaattggtctgagtgaaaaggaagcaagttctagtaaagtt
ggtggagatgatgtcgatttagacaaagatgataatcacatcactggactggaagatgaa
ggtgttgagctttcaccgttgaatagaagcatagttgataaagctgtcgcggctagcgca
caagttgcaaatcagccttccggcccaccagtggacacgagtgaagttttatttgatatt
cataagcttcgtaggaagagtgagcgtggattgttgcattttgcggatactatggctccg
cagggaaagtctatcaaaagaatgaggggcttcactgccgcaaccttggaggctgctcgt
gtgactgatggtggggctgggaaggaagcagctctggttgctgccaccaaagaactagaa
cgtagtttcaataaagctgacttcaagaatatgaaggtggttggacagttcaatctagga
ttcgttctcgcaaagttggatcaggatctcttcattgttgaccagcatgcatctgacgaa
aagtacaattttgagcgtctaacaaagtccacaattctgaacaagcaaccccttctgcgg
cctttgtctttggagctgtcagctgcagaggaggtcattgttactactcacattgaaaca
ttcagacaaaatgggtttgattttgtggagaacgaggatgcccctttaggaagtcggctt
tcacttagtgctgtgccattcagccagaatatcacattcggaattggagatgtgcaggaa
ctagtaggaatcttggcaaacggaacggcgccagttgctaaaccgagtactactaatggc
actggatcacaaaatggatcacagaagggaggacttttatctgctatacgtccatctcgg
gttcgaggaatgttagcctctcgggcttgtagatcttccataatgataggcgacgctctg
tgcaaaaaagagatggagaagattctatgccatttggcagacctggatgccccttggaac
tgtccccacggtcggccaaccatgcggcatttggcagatcttgaagtgttacgacaaaag
tag
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