Physcomitrium patens (spreading earthmoss): 112285863
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Entry
112285863 CDS
T01041
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112285863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112285863
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112285863
Complex C
U5 SnRNP specific factors
112285863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
TPR_16
HAT_PRP39_C
CFAP70_TPR_C
Suf
TPR_17
HAT_Syf1_CNRKL1_C
ubiquitin
TPR_8
TPR_15
TPR_2
TPR_CcmH_CycH
TPR_6
TPR_12
TPR_1
TPR_9
ARM_TT21_C
ARM_TT21_2nd
NatA_aux_su
Ubiquitin_4
HAT_Syf1_M
Y4kD_C
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
112285863
NCBI-ProteinID:
XP_024382936
UniProt:
A0A2K1K7R5
LinkDB
All DBs
Position
8:complement(11411999..11415502)
Genome browser
AA seq
1016 aa
AA seq
DB search
MHLLVRNFAGRTISVSLPEGAATVQTLKETVEARERILARHFGVVYGNKQLTQDDALLGS
YGVTDGSTLHMTGRVLGGMQAPVVPKPRLDFLNSRPPANYVAGLGRGATGFTTRSDIGPA
RAAPDLPDRTATTIGGAAAAIAGAGRGKGKGGNEEEEEEAEEKGYDENQKFDEFEGNDVG
LFASGEYDEDDKEADAVWEDIDKRMDSRRKDRREARLKKEIEKYRASNPKITEQFADLKR
KLVTLSASEWDSIPEIGDYSLRNKKKRFESFVPPPDTLFERAKQEHEHATALDPRSRAAG
VETPYGQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKINSDAE
ISDIKKARLLLKSVIQTNPKHAPGWIAAARLEEVAGKIQAARNFIQQGCEECPQNEDVWL
EACRLATPQNAKAVLAQGVMAIPNSVKLWMQASKLESDDISKSRVLRKALEHIPDSVRIW
KAVVELAKEDDARILLSRAVECCPLHVELWLALARLETYDNAKRVLNKAREMLPTETSIW
ITAAKLEEANRNIAMVGKIIDRAIRTLQRDGVSIDREAWMKEAEAAERAGSVATCQAIIT
STIGIGVEEEDRKRTWVADADECKKRGSVETARAIYAHALTFFPGKKSVWLRAAQLEKSH
GTRESLDAMLKKAVGYCPQAEVLWLMGAKEKWLAGDVPSARAILQEAYAAIPNSEEIWLA
AFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREIGNVDKERELLEEGLERFPQ
FHKLWLMLGQLKDRLGQPEAARETYERALRNCPHSIPLWLSAAALEEKLGGLSKARAVLT
KARLKNTHNPELWLAAIRVEAHAGNKKDAESLMAKALQDCPSSGRLWAEAIDMAPRPQRK
SKSVDALKRCDQDPYVIAAVAKLFWQDRKVDKARSWLNRAVTLAPDIGDFWAQLYKFELQ
HSGEDVQQDVIQRCSAAEPRHGEKWTKVSKAVENAHFSTEAILKKLVLAAKDEETM
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgttagtacggaattttgcggggaggacaatctctgtgtccttgccggaaggg
gctgcaactgtgcaaacgctgaaggagactgtggaagcgcgagagcgcattcttgcgcgg
cattttggtgttgtgtatggtaacaagcagctcacacaggacgatgctttgcttggaagc
tatggggtaacggatggttccactctacatatgacaggaagagttctgggaggtatgcaa
gcgccggtcgtccccaagcctcggttggattttctgaactcgcgacctccggctaattat
gttgctggattggggcgtggtgccaccgggttcaccactaggtctgatattggacctgca
agagctgcacctgatttgccggacaggactgcgactacaatcggaggagctgcagcagcg
atagcaggagctgggcgtgggaaaggcaaaggaggaaacgaagaggaggaggaggaagcg
gaggagaaagggtatgatgaaaatcagaagttcgacgagtttgaaggaaatgatgtggga
ttatttgcttctggagagtatgatgaagatgacaaggaggctgatgccgtatgggaggat
attgacaagcgcatggactccaggcggaaggatcgccgggaggcacgtctgaagaaagaa
atcgagaagtatcgtgcttctaatcctaaaattacagagcagtttgcagatttgaagcgg
aagttagtgactttatcagcctcggagtgggatagtataccagaaatcggggactattcg
ctgagaaacaaaaagaaaagatttgagagttttgttcccccaccagacactctttttgaa
cgtgccaagcaggaacatgaacatgcaactgcgcttgaccctcggtccagagctgcgggt
gtggaaaccccgtacgggcagactcctgttacagatcttacagccgttggagaaggaaga
ggtacagtgttatcccttaagctggatcgtctttccgattctgtgagcggattgactgtc
gtagatccaaaggggtatctcaccgatctaaaaagcatgaaaatcaatagcgacgccgaa
atttctgacataaaaaaggctaggttattgctaaagtctgtcatacagacgaacccgaag
catgcccctggttggattgcagctgcgcgtctggaagaggttgccggaaaaattcaagca
gccaggaatttcatacagcaaggatgcgaggaatgccctcaaaacgaggatgtctggctt
gaggcctgccggttagcgactccccagaatgccaaagctgttttggctcagggagttatg
gccatccctaattctgtgaagttgtggatgcaagcgtcgaaacttgagagtgatgatatc
agcaagtcacgggtgttgcggaaagcacttgaacatataccagactctgtgaggatttgg
aaagctgtagttgaactcgccaaggaagatgatgcaagaatccttctctcacgagccgtt
gaatgttgtcctcttcacgtggagctttggctggctttggctcgccttgagacctacgat
aatgcaaagcgtgttcttaacaaagcacgtgaaatgttaccaacggagacaagtatatgg
attactgcagctaagctagaagaagctaacaggaatatagctatggtgggcaagatcatt
gacagagctattcgtacgctccaacgcgatggagtttctatagacagggaagcctggatg
aaggaggcagaagcagcggagcgtgccggctcagtggcgacttgccaagctatcattacc
tcaactatcggcattggagtagaagaagaggacaggaaaagaacatgggtggcagacgcg
gatgagtgcaagaaacgtggatctgtggaaacagctcgagcaatttacgctcatgcattg
acgttctttccgggcaagaagagtgtttggttgcgagccgcacaattggagaagagtcat
ggaactcgggaatctctggacgccatgttgaagaaggcggtaggttattgccctcaggct
gaagtgttgtggctcatgggtgccaaggagaagtggttagctggggatgttccttcagct
cgtgccattcttcaagaggcttatgctgctatacctaattccgaggagatttggttggct
gcctttaaattagagtttgagaatcatgaaccagagagagctcggatgctgttagcaaag
gctagagagagaggaggcactgagcgggtctggatgaagtcagcgatagtggagcgtgag
ataggaaatgtggacaaggagagagaattgttggaagaaggtctggaaagatttccacaa
ttccacaagctatggcttatgctagggcagctcaaggatcgtcttggccagcctgaagca
gcgcgagagacgtacgagagagcattgcggaattgtcctcacagtattccactttggtta
tctgcggctgccttggaagagaagttgggtggtttgagtaaggccagagctgttctcacg
aaggccaggctcaagaatacacacaatcctgagctttggctggctgccatccgcgtcgag
gctcatgctggaaacaagaaggatgcagagtctctgatggccaaggctctacaagattgt
ccttctagtggacgcctatgggcagaagccatcgatatggctccacgacctcaacgcaag
tctaagagtgttgatgcgttgaaacgctgtgatcaggacccatatgttattgcagctgtt
gcgaagttgttttggcaggaccgtaaggtggacaaggcaagaagttggttgaatcgagct
gtgactttggctcctgacattggagacttctgggcccagctgtacaagtttgagcttcag
cattcgggcgaggatgtgcaacaggatgtaattcagagatgttcagctgctgagcctcgg
catggtgagaagtggactaaagtttctaaggcggttgagaatgcgcatttctctacagag
gctattttgaagaaacttgttctggcagcgaaggacgaagaaacgatgtaa
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