Physcomitrium patens (spreading earthmoss): 112285864
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Entry
112285864 CDS
T01041
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112285864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112285864
03036 Chromosome and associated proteins [BR:
ppp03036
]
112285864
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112285864
Enzymes [BR:
ppp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
112285864
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112285864
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112285864
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
112285864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
112285864
NCBI-ProteinID:
XP_024382938
LinkDB
All DBs
Position
8:complement(11161201..11169709)
Genome browser
AA seq
1041 aa
AA seq
DB search
MATPAPQKPWKSEYAKSGRASCRTCSSPIAKDAFRLAKMVQSTQFDGMMAYWHHAGCIFK
KKKQIHDWNDVEGADTLRWEDQQNLRKFIEGGPVEDANEEGQSAKGKGAKSKAKTKGVNE
DGDESSGEYAIENAKSSRSTCKSCNEKIDKGQVRISTMVAADGGRFRGKVPQWRHAKCFL
SMGHFSGPLASLPGWDTLTSEDQAQVQTLAKPSAAAKRKEAVKESKATTAKEPKAGRGKK
TQAEQDETVEKPNKRRKQNDGKEAKATDGVGTTVAPKKVPKAKGPVTAGKQTKLDPELES
KLEKQSKSLWEIKDKLREHVSIVELREMLAANNQDTTGSEYDVRERCADGMMFGVLAKCP
LCEGYMEYQGGSYRCRGYLSAWSKCTFTTLTPERTTAKWEIGEACDNDYLLGWYKTQSKM
KGERLLVPASQAEPTIAEKPRNCSESFLEGCEFAVIGRLSITHAKLKEKIEKAGGRVRSG
ATGIGNTVTCVVTTENVVEDEKHRRDLEYARAVPIVKEQYLLDCFEKKEKLPVDGYRLEI
GSKPSIVKVKVKGRGAVHEDSGLQDTGHIVEEGKVIYTTTLNRSELATGINSFYVLQLIE
EDAKKTVHLYRKWGRVGNDRIGGDKIEKLSKADGIKEFKRLFKEKTGNDWESWVNREDFE
KQPGKFYPLDIDYGVDEVPKPDKALVGSKSRLHPRVINLMKMLFDLETYKAAMMEFEINM
SEMPLGKLSKRHIERGYEVLTEIQNILKEAVHGPREQGLLVDASNRFFTLIPTVHPMIIS
DEQTLKSKIHMLDALRDIEIASEFLGSKVEEGTEEEDPLDTHYKKLHCDIRPIPHDSGDF
KLVEKYLKQTHAPTHTDWALELEDVFAVDREGEADSFAPFKMCLDNHMLLWHGSRTTNYV
GILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYTTKKNPTGLMLLSEVALGKTN
NLKSAKYMEKPLRGTNSTLGLGKTKPLETEFKKFEGDVTVPCGQPVPSGIRSDLMYNEYI
VYDTAQVKLRFLLKVNFKHKR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcctgcaccgcagaagccatggaagtcggaatatgcgaaatcgggaagagct
tcctgtcgcacttgctcaagtcccatcgccaaagatgcgtttcgcctcgccaagatggtg
caatccactcaattcgacggcatgatggcttactggcatcatgcaggttgcattttcaag
aagaagaaacaaattcatgattggaacgatgttgaaggagctgacactctccgatgggag
gatcagcagaaccttcgcaaattcattgaaggtggacctgtagaggatgccaacgaagaa
ggtcaatctgcaaaaggaaaaggagccaaaagtaaagcaaaaactaagggcgtaaatgaa
gatggagatgaaagtagtggggagtacgcgatagaaaacgcgaaaagttcgcgctcaact
tgcaaaagctgcaatgaaaagattgacaagggccaggtgcgtatctctactatggtggcc
gctgatggtggaaggtttcgaggaaaagtgccacaatggcgtcacgcgaagtgtttcctt
tctatgggtcatttttcgggtccgttagcaagtttacctggatgggacacccttacgtcc
gaagaccaggcccaagttcaaactctagctaaaccgtctgctgcggctaagcggaaagag
gcagtcaaggaatctaaggccacgactgcgaaagaacctaaggctggtcgtggaaagaaa
actcaagctgaacaggatgaaactgttgagaagcccaacaaacgtaggaagcaaaacgat
ggaaaggaagcaaaggcaactgatggtgtcggtacgacagttgctccgaagaaggtgcca
aaggcaaaagggcctgttactgcaggcaaacaaaccaagcttgatcctgaattggaaagt
aagttggagaagcagtcaaagagcctgtgggaaattaaagataaattacgtgaacatgtg
tcaatagtggagctccgggaaatgctggctgccaataatcaggatactactggctcggag
tatgatgtgcgggagcgctgtgcggatggaatgatgtttggagtcttggcgaagtgtcca
ctttgtgaaggttatatggagtatcaagggggatcatataggtgtcgaggatatttgtcg
gcctggagtaaatgcaccttcacgacgttgacacccgaaagaaccacggctaagtgggaa
atcggagaagcatgtgacaatgattatcttttagggtggtataagacacaaagcaagatg
aaaggtgagcggctgcttgtgccagcatcccaagccgagcccaccatcgctgagaagcct
cgtaactgcagtgaatcatttctggagggatgcgaattcgcggttattgggaggctatcg
attactcatgcgaagctgaaggaaaagattgagaaagctggaggtcgcgttcggtctggg
gctactggtattggaaacactgtgacatgcgttgttactacagaaaatgttgttgaggat
gagaagcatcgtcgcgatttagaatatgccagggcagtgcctattgtgaaggaacagtat
ctccttgattgtttcgagaagaaggagaagcttcctgtggacggatacaggttggagatt
ggttcaaagccttctatcgtgaaagttaaggtcaagggtcgaggtgcagtgcatgaagac
tccgggttgcaagacactggtcacattgttgaggaaggcaaagtcatatacacaacaacc
ctcaaccgctctgaactcgctacaggaattaacagtttttatgttttgcagcttattgag
gaagatgcaaaaaagacagtccatctgtacaggaaatggggccgtgttggtaacgacagg
ataggcggtgacaagatagagaaattgtcaaaagctgatggaatcaaagagttcaagcga
ctgttcaaagagaaaacaggaaatgactgggagtcatgggtgaatcgcgaagatttcgaa
aaacaaccgggaaaattttatcctcttgatatcgactacggtgtggatgaggtgccgaag
ccggataaggcacttgttggttcaaaaagtaggctgcatccacgagtcatcaatctcatg
aagatgttgtttgatcttgaaacttacaaggctgctatgatggaattcgaaattaacatg
tcagaaatgcctttaggcaagctgagcaaacgccatattgagcgaggttatgaggtgctg
actgagattcaaaatattctgaaggaggccgtacatggtccacgcgagcaaggattgctg
gttgatgcaagcaaccgcttcttcactttaattccgactgttcatccaatgatcatctcg
gacgagcagacattgaaatctaagatccatatgttagatgcattgcgtgacattgaaatt
gcgtcagaattcttgggctcaaaagtagaagaaggcactgaggaggaggatccactggat
acacattacaagaagctgcattgtgacattagacctattccacatgatagcggtgacttc
aagctggtggagaaatacttgaaacaaactcatgcgccaacccacacagattgggctctg
gagttagaggatgtatttgctgttgacagagaaggagaagctgatagttttgcacctttt
aagatgtgtcttgataaccacatgctgctctggcacggttctcgaacaacaaattatgtt
ggtattctgagccaaggtctgagaattgctcctcctgaagctccagtaacaggttacatg
tttggaaaaggactgtacttcgctgatttggtcagcaagagtgctcaatactgctatacc
acaaagaaaaatccaactgggttgatgctactcagtgaagtagccctgggtaaaacaaat
aacctcaaaagcgcgaagtatatggagaagccgcttcgaggaactaactccactctgggg
cttggtaaaacgaagccacttgagacggagtttaagaaattcgaaggcgatgttaccgtg
ccatgtggccagccagtaccatctggcattcgaagtgacctcatgtataatgagtatatt
gtgtatgatacagctcaggtgaaactacgatttttgttgaaggtcaacttcaagcacaag
cgctaa
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